Factsheet for Os07t0143200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G253900.2	Wheat	nucleus	49.28	56.98
TraesCS2B01G273500.1	Wheat	nucleus	49.28	56.98
HORVU2Hr1G060680.1	Barley	nucleus	48.79	55.8
OQU88421	Sorghum	nucleus	54.11	54.24
Os03t0782500-01	Rice	nucleus	47.58	48.05
TraesCS2D01G254400.3	Wheat	nucleus	49.76	47.91
CDY67566	Canola	nucleus, plastid	22.71	34.31
CDY00603	Canola	nucleus, plastid	22.71	34.31
Os04t0618600-01	Rice	nucleus	13.53	30.94
Bra000283.1-P	Field mustard	nucleus	27.54	27.6
CDX83509	Canola	nucleus	27.54	27.6
Bra007430.1-P	Field mustard	nucleus	28.02	27.23
CDY14866	Canola	nucleus	26.33	27.05
CDY42809	Canola	nucleus	26.81	26.81
CDY30375	Canola	nucleus	26.09	26.6
Bra037742.1-P	Field mustard	nucleus	26.09	26.6
CDX70453	Canola	nucleus	26.09	26.54
CDY29961	Canola	nucleus	26.09	26.54
Os06t0164400-01	Rice	cytosol, mitochondrion, nucleus	12.56	26.4
CDY06026	Canola	nucleus	28.02	26.24
CDX71916	Canola	nucleus	28.02	26.19
AT3G59060.2	Thale cress	nucleus	27.54	25.68
Solyc07g043580.2.1	Tomato	nucleus	29.95	25.05
AT2G43010.5	Thale cress	extracellular, vacuole	28.26	24.79
KRH45975	Soybean	nucleus	31.16	24.57
KRG99030	Soybean	nucleus	32.13	24.31
Os02t0805250-00	Rice	nucleus	16.43	24.29
PGSC0003DMT400041156	Potato	nucleus	29.95	23.98
VIT_12s0028g01110.t01	Wine grape	nucleus	32.13	23.84
KRH73584	Soybean	nucleus	32.13	23.67
Os12t0610200-01	Rice	nucleus	25.36	23.6
KRH14535	Soybean	nucleus	31.4	23.13
Os07t0182200-01	Rice	cytosol	6.52	19.85
Os05t0139100-01	Rice	nucleus	20.77	17.03
Os01t0286100-01	Rice	nucleus	24.15	15.7
Os10t0556200-01	Rice	nucleus	17.39	15.48
Os03t0797600-01	Rice	nucleus	10.63	14.97
Os06t0184000-00	Rice	nucleus	14.25	14.82
Os03t0639300-01	Rice	nucleus	9.18	12.38
Os02t0795800-00	Rice	endoplasmic reticulum, mitochondrion, nucleus, plastid	7.73	11.43
Os06t0193400-01	Rice	nucleus	11.11	9.62
Os02t0564700-01	Rice	nucleus	11.84	9.35

Protein Annotations

MapMan:15.5.32	MapMan:26.1.1.4	Gene3D:4.10.280.10	EntrezGene:4342383	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EMBL:JN400276	UniProt:K4F270
EnsemblPlantsGene:Os07g0143200	EnsemblPlants:Os07t0143200-01	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF194
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002923B8D	RefSeq:XP_015648046.1	InterPro:bHLH_dom	SEG:seg

Description

PIL14Phytochrome-interacting bHLH factor, Cross-talk between light and stress signaling (Os07t0143200-01);Cold-induced alternative splicing variant of OsPIF14 (Os07t0143200-02)

Coordinates

chr7:+:2207362..2209018

Molecular Weight (calculated)

44491.0 Da

IEP (calculated)

4.583

GRAVY (calculated)

-0.489

Length

414 amino acids

Sequence
(BLAST)

001: MVLDRCKDWR ISFCLLAWRS SDGELVELLW QDGGVVAHAQ TRHRSSDVLA RSGVTGEEET ASAWFADGGG GGGGDDDALG LGMGRDIYSQ LWHSFANVDG
101: HAAGALALAT PTPTPRAAAR SDDVSSRLDE ADLSICGSNA VVAPALPADD DDDIDAAAPR EEEEEEEEGP GAARAAGASS SGGSGSGSGS YPLFKRGREE
201: LVDSLSEVAD ETRPSKRPAA KRRTRAAEVH NLSERRRRDR INEKLRALQE LVPHCNKTDK ASILDEAIEY LKSLQMQVQI MWMTTGIVPM MFPGTHQLMP
301: PMGMGLNTAC MPGAQAQGLN QMQRTTYYMN NSLPNQMPQI PSPAMNAPSV PDDMQNDNRI RGPRNPFLHC NDTLTATAQV PGLFTYGSQI AEQNEIQELL
401: SGAVIPSSSD GTIK

Best Arabidopsis Sequence Match ( AT1G09530.3 )
(BLAST)

001: MPLFELFRLT KAKLESAQDR NPSPPVDEVV ELVWENGQIS TQSQSSRSRN IPPPQANSSR AREIGNGSKT TMVDEIPMSV PSLMTGLSQD DDFVPWLNHH
101: PSLDGYCSDF LRDVSSPVTV NEQESDMAVN QTAFPLFQRR KDGNESAPAA SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD RFTQTQEPLI TSNKPSLVNF
201: SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK DSEDKVLNES VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL
301: SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS
401: MASGYYLPPA VMFPPGMGHY PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG SSTIGNGSTR DLSGSKDQTT
501: TNNNSNLKPI KRKQGSSDQF CGSS

Arabidopsis Description

PIF3Transcription factor PIF3 [Source:UniProtKB/Swiss-Prot;Acc:O80536]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.