Factsheet for Os03t0782500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G422000.1	Wheat	nucleus	70.24	70.24
TraesCS5D01G428400.2	Wheat	nucleus	70.98	69.62
HORVU5Hr1G102240.3	Barley	nucleus	67.07	69.44
TraesCS5A01G420200.1	Wheat	nucleus	65.12	63.57
Zm00001d013130_P001	Maize	nucleus	59.76	63.31
Zm00001d034298_P001	Maize	nucleus	64.63	62.8
Os07t0143200-01	Rice	nucleus	48.05	47.58
KXG37432	Sorghum	plastid	44.63	37.97
CDY00603	Canola	nucleus, plastid	25.37	37.96
CDY67566	Canola	nucleus, plastid	25.37	37.96
Bra000283.1-P	Field mustard	nucleus	32.93	32.69
CDX83509	Canola	nucleus	32.93	32.69
Os04t0618600-01	Rice	nucleus	14.39	32.6
Bra007430.1-P	Field mustard	nucleus	33.66	32.39
CDY42809	Canola	nucleus	32.68	32.37
CDY29961	Canola	nucleus	31.71	31.94
CDX70453	Canola	nucleus	31.71	31.94
CDY30375	Canola	nucleus	31.46	31.77
Bra037742.1-P	Field mustard	nucleus	31.46	31.77
CDY14866	Canola	nucleus	31.22	31.76
CDY06026	Canola	nucleus	33.66	31.22
CDX71916	Canola	nucleus	33.17	30.7
AT3G59060.2	Thale cress	nucleus	33.17	30.63
Solyc07g043580.2.1	Tomato	nucleus	35.85	29.7
AT2G43010.5	Thale cress	extracellular, vacuole	33.41	29.03
Os06t0164400-01	Rice	cytosol, mitochondrion, nucleus	13.9	28.93
VIT_12s0028g01110.t01	Wine grape	nucleus	38.29	28.14
KRH45975	Soybean	nucleus	35.85	28.0
PGSC0003DMT400041156	Potato	nucleus	35.12	27.85
KRG99030	Soybean	nucleus	36.83	27.61
KRH73584	Soybean	nucleus	36.34	26.51
Os12t0610200-01	Rice	nucleus	28.05	25.84
KRH14535	Soybean	nucleus	35.12	25.62
Os02t0805250-00	Rice	nucleus	17.07	25.0
Os07t0182200-01	Rice	cytosol	7.32	22.06
Os05t0139100-01	Rice	nucleus	25.37	20.59
Os01t0286100-01	Rice	nucleus	25.37	16.33
Os10t0556200-01	Rice	nucleus	18.29	16.13
Os06t0184000-00	Rice	nucleus	15.37	15.83
Os03t0797600-01	Rice	nucleus	11.22	15.65
Os03t0639300-01	Rice	nucleus	10.24	13.68
Os02t0795800-00	Rice	endoplasmic reticulum, mitochondrion, nucleus, plastid	8.05	11.79
Os06t0193400-01	Rice	nucleus	12.44	10.67
Os02t0564700-01	Rice	nucleus	13.41	10.5

Protein Annotations

MapMan:15.5.32	MapMan:26.1.1.4	Gene3D:4.10.280.10	ProteinID:ABF99196.1	ProteinID:ABF99198.1	EMBL:AK105637
ProteinID:BAF13379.1	ProteinID:BAS86695.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0045893	GO:GO:0046983
GO:GO:0080006	GO:GO:0090229	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlantsGene:Os03g0782500
EnsemblPlants:Os03t0782500-01	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF194	UniProt:Q10CH5
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0000DB4763	InterPro:bHLH_dom	SEG:seg	:

Description

PIL13Phytochrome-interacting factor-like bHLH protein, Stress-responsive transcription factor, Regulator of reduced internode elongation under drought conditions (Os03t0782500-01)

Coordinates

chr3:+:32432551..32435839

Molecular Weight (calculated)

43857.3 Da

IEP (calculated)

6.699

GRAVY (calculated)

-0.605

Length

410 amino acids

Sequence
(BLAST)

001: MAICSTDNEL VELLWHNGGV VAQPQAAQAR VVSSSGRGQS ASVLTGDDTE TAAWFPDTLD DALEKDLYTQ LWRSVTGDAF PAAAAAGPSS HHAPPPDLPP
101: PAARPPMRSG IGSSWTGDIC SAFCGSNHIP ETAAQRCRDA GAALPPERPR RSSTHDGAGT SSSGGSGSNF GASGLPSESA SAHKRKGRED SDSRSEDAEC
201: EATEETKSSS RRYGSKRRTR AAEVHNLSER RRRDRINEKM RALQELIPHC NKTDKASILD EAIEYLKSLQ MQVQIMWMTT GMAPMMFPGA HQFMPPMAVG
301: MNSACMPAAQ GLSHMSRLPY MNHSMPNHIP LNSSPAMNPM NVANQMQNIQ LREASNPFLH PDGWQTVPPQ VSGPYASGPQ VAQQNQIPKA SASTVLPNSG
401: AEQPPTSDGI

Best Arabidopsis Sequence Match ( AT3G59060.1 )
(BLAST)

001: MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPDDVI
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG

Arabidopsis Description

PIF5Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.