Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013130_P001 | Maize | nucleus | 39.63 | 49.35 |
| Zm00001d034298_P001 | Maize | nucleus | 40.87 | 46.68 |
| Os03t0782500-01 | Rice | nucleus | 37.97 | 44.63 |
| HORVU5Hr1G102240.3 | Barley | nucleus | 35.06 | 42.68 |
| TraesCS5B01G422000.1 | Wheat | nucleus | 35.48 | 41.71 |
| TraesCS5D01G428400.2 | Wheat | nucleus | 35.68 | 41.15 |
| TraesCS5A01G420200.1 | Wheat | nucleus | 32.16 | 36.9 |
| OQU88421 | Sorghum | nucleus | 29.67 | 34.62 |
| CDY00603 | Canola | nucleus, plastid | 15.35 | 27.01 |
| CDY67566 | Canola | nucleus, plastid | 15.35 | 27.01 |
| EES11436 | Sorghum | nucleus | 9.96 | 25.53 |
| CDY14866 | Canola | nucleus | 17.22 | 20.6 |
| Bra007430.1-P | Field mustard | nucleus | 18.05 | 20.42 |
| CDY29961 | Canola | nucleus | 17.22 | 20.39 |
| CDX70453 | Canola | nucleus | 17.22 | 20.39 |
| OQU75890 | Sorghum | nucleus | 12.24 | 20.27 |
| CDY30375 | Canola | nucleus | 17.01 | 20.2 |
| Bra037742.1-P | Field mustard | nucleus | 17.01 | 20.2 |
| CDX83509 | Canola | nucleus | 17.01 | 19.85 |
| Bra000283.1-P | Field mustard | nucleus | 17.01 | 19.85 |
| CDY06026 | Canola | nucleus | 18.05 | 19.68 |
| CDX71916 | Canola | nucleus | 18.05 | 19.64 |
| CDY42809 | Canola | nucleus | 16.6 | 19.32 |
| AT2G43010.5 | Thale cress | extracellular, vacuole | 18.26 | 18.64 |
| Solyc07g043580.2.1 | Tomato | nucleus | 19.09 | 18.59 |
| AT3G59060.2 | Thale cress | nucleus | 17.01 | 18.47 |
| KRH45975 | Soybean | nucleus | 19.92 | 18.29 |
| VIT_12s0028g01110.t01 | Wine grape | nucleus | 21.16 | 18.28 |
| PGSC0003DMT400041156 | Potato | nucleus | 19.5 | 18.18 |
| KRG99030 | Soybean | nucleus | 20.33 | 17.92 |
| KRH73584 | Soybean | nucleus | 20.33 | 17.44 |
| KXG31309 | Sorghum | nucleus | 10.37 | 17.12 |
| KRH14535 | Soybean | nucleus | 19.5 | 16.73 |
| OQU88567 | Sorghum | nucleus | 9.54 | 16.61 |
| KXG37359 | Sorghum | nucleus | 9.75 | 16.55 |
| OQU91282 | Sorghum | nucleus | 18.05 | 16.11 |
| KXG23955 | Sorghum | nucleus | 15.56 | 15.79 |
| KXG32305 | Sorghum | nucleus | 17.01 | 13.58 |
| EES05953 | Sorghum | nucleus | 10.79 | 13.23 |
| OQU89497 | Sorghum | nucleus | 12.03 | 12.47 |
| EER89334 | Sorghum | nucleus | 11.41 | 12.3 |
| OQU92150 | Sorghum | nucleus | 13.28 | 11.92 |
| KXG21255 | Sorghum | nucleus | 16.6 | 11.63 |
| KXG30460 | Sorghum | nucleus | 9.34 | 8.89 |
| KXG19523 | Sorghum | nucleus | 8.51 | 8.33 |
Protein Annotations
| EnsemblPlants:KXG37432 | EnsemblPlantsGene:SORBI_3001G068301 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF194 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:KXG37432 | ProteinID:KXG37432.2 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000B42370A | UniProt:A0A1B6QHN1 | MapMan:15.5.32 | : |
Description
hypothetical protein
Coordinates
chr1:-:5229397..5233656
Molecular Weight (calculated)
52616.9 Da
IEP (calculated)
12.549
GRAVY (calculated)
-0.677
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCCGGRAAA TDLPHKSSPA CSLHGGGGRR RLRKASLLER SSTPFRRRGV LLRVLEILPR WTAMRGRRRR IRRSPSSRTT TSSSCCGTTG ASSRSPRRTT
101: GRRRRRRRRP PTATARLAPA ASPARRPPRG SRTPSTTPSR RTCTRISGTA PSPTPPRNTR ARSWLPRSRR RRRRCRLGAA ASSRAGPATS APPSAAATRC
201: PGRRQGPAGR TLHCSRQGPA VPAGTTAHRR PVGLEATMGD PGCQVTASMS TRGRGGVETT QIVRVRMPSV RRQLRRPNRR GDMGRNAGLV QLKFIISQRG
301: RDRINEKMRA LQELIPHCNK TDKASILDET IEYLKSLQMQ VQIMWMTSGM APMMFPGAHQ FMPPMALGMN SGCIPAAQGL SQMPRLPYMN HPLPNHIPLN
401: SSPAMNPLNA ANQMMQNGHL REASNHFLHL DGRTAVVPQV PGPHVYGHQI AQAEEPNSIL EVAASTVVPT SRAGQPPSFD GV
101: GRRRRRRRRP PTATARLAPA ASPARRPPRG SRTPSTTPSR RTCTRISGTA PSPTPPRNTR ARSWLPRSRR RRRRCRLGAA ASSRAGPATS APPSAAATRC
201: PGRRQGPAGR TLHCSRQGPA VPAGTTAHRR PVGLEATMGD PGCQVTASMS TRGRGGVETT QIVRVRMPSV RRQLRRPNRR GDMGRNAGLV QLKFIISQRG
301: RDRINEKMRA LQELIPHCNK TDKASILDET IEYLKSLQMQ VQIMWMTSGM APMMFPGAHQ FMPPMALGMN SGCIPAAQGL SQMPRLPYMN HPLPNHIPLN
401: SSPAMNPLNA ANQMMQNGHL REASNHFLHL DGRTAVVPQV PGPHVYGHQI AQAEEPNSIL EVAASTVVPT SRAGQPPSFD GV
001: MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPDDVI
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQTVQQQ PADMLGFGSP AGPQSQLSAP ATTDSLHMGK IG
Arabidopsis Description
PIF5Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.