Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73584 | Soybean | nucleus | 88.79 | 88.79 |
| KRH45975 | Soybean | nucleus | 65.48 | 70.1 |
| KRG99030 | Soybean | nucleus | 66.73 | 68.56 |
| VIT_12s0028g01110.t01 | Wine grape | nucleus | 46.98 | 47.31 |
| Solyc07g043580.2.1 | Tomato | nucleus | 40.75 | 46.26 |
| PGSC0003DMT400041156 | Potato | nucleus | 42.17 | 45.84 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 12.46 | 45.75 |
| CDY00603 | Canola | nucleus, plastid | 20.64 | 42.34 |
| CDY67566 | Canola | nucleus, plastid | 20.64 | 42.34 |
| Bra000283.1-P | Field mustard | nucleus | 30.96 | 42.13 |
| CDX83509 | Canola | nucleus | 30.78 | 41.89 |
| CDY42809 | Canola | nucleus | 30.25 | 41.06 |
| Bra037742.1-P | Field mustard | nucleus | 29.0 | 40.15 |
| CDY30375 | Canola | nucleus | 29.0 | 40.15 |
| CDY29961 | Canola | nucleus | 29.0 | 40.05 |
| CDX70453 | Canola | nucleus | 29.0 | 40.05 |
| CDY14866 | Canola | nucleus | 28.29 | 39.45 |
| AT2G43010.5 | Thale cress | extracellular, vacuole | 31.67 | 37.71 |
| Bra007430.1-P | Field mustard | nucleus | 28.29 | 37.32 |
| CDY06026 | Canola | nucleus | 29.0 | 36.88 |
| CDX71916 | Canola | nucleus | 29.0 | 36.79 |
| HORVU5Hr1G102240.3 | Barley | nucleus | 25.8 | 36.62 |
| AT3G59060.2 | Thale cress | nucleus | 28.65 | 36.26 |
| KRH04711 | Soybean | plastid | 10.14 | 35.62 |
| Os03t0782500-01 | Rice | nucleus | 25.62 | 35.12 |
| TraesCS5B01G422000.1 | Wheat | nucleus | 25.44 | 34.88 |
| TraesCS5D01G428400.2 | Wheat | nucleus | 25.8 | 34.69 |
| KRH76132 | Soybean | nucleus | 10.85 | 33.33 |
| TraesCS2B01G273500.1 | Wheat | nucleus | 21.17 | 33.24 |
| TraesCS5A01G420200.1 | Wheat | nucleus | 24.73 | 33.1 |
| TraesCS2A01G253900.2 | Wheat | nucleus | 21.0 | 32.96 |
| Zm00001d034298_P001 | Maize | nucleus | 24.2 | 32.23 |
| HORVU2Hr1G060680.1 | Barley | nucleus | 20.64 | 32.04 |
| Os07t0143200-01 | Rice | nucleus | 23.13 | 31.4 |
| Zm00001d013130_P001 | Maize | nucleus | 21.35 | 31.01 |
| OQU88421 | Sorghum | nucleus | 22.42 | 30.51 |
| KRH72281 | Soybean | nucleus, plastid | 6.76 | 30.4 |
| KRH32290 | Soybean | nucleus | 25.98 | 29.74 |
| KRH67519 | Soybean | nucleus | 25.44 | 28.49 |
| TraesCS2D01G254400.3 | Wheat | nucleus | 21.71 | 28.37 |
| KRH19683 | Soybean | nucleus | 25.62 | 28.29 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 8.54 | 26.67 |
| KRH28453 | Soybean | nucleus | 13.17 | 25.43 |
| KRH04595 | Soybean | nucleus | 12.28 | 25.37 |
| KRH55381 | Soybean | cytosol | 3.02 | 24.64 |
| KRH05665 | Soybean | nucleus | 12.81 | 24.24 |
| KRH15381 | Soybean | nucleus | 12.81 | 24.24 |
| KRH77016 | Soybean | nucleus | 15.12 | 22.67 |
| KRH33663 | Soybean | nucleus | 17.62 | 22.05 |
| KRH71345 | Soybean | nucleus | 6.76 | 21.47 |
| KRH54630 | Soybean | nucleus | 15.12 | 21.14 |
| KRH68348 | Soybean | nucleus | 19.04 | 20.7 |
| KRH65412 | Soybean | nucleus | 14.59 | 20.65 |
| KRG88937 | Soybean | nucleus | 17.08 | 20.65 |
| KRH75301 | Soybean | nucleus | 16.55 | 20.31 |
| KRG96615 | Soybean | nucleus | 18.68 | 20.27 |
| KRG96663 | Soybean | nucleus | 22.24 | 19.75 |
| KXG37432 | Sorghum | plastid | 16.73 | 19.5 |
| KRH68390 | Soybean | nucleus | 21.53 | 19.39 |
| KRH33733 | Soybean | nucleus | 22.78 | 18.52 |
| KRG90443 | Soybean | nucleus | 23.31 | 18.14 |
| KRH32094 | Soybean | nucleus | 8.9 | 17.67 |
| KRH03075 | Soybean | nucleus | 11.21 | 17.17 |
| KRG95612 | Soybean | nucleus | 8.72 | 16.78 |
| KRH67287 | Soybean | nucleus | 8.72 | 16.78 |
| KRH05051 | Soybean | nucleus | 11.57 | 16.25 |
| KRG92679 | Soybean | nucleus | 8.9 | 15.06 |
| KRH34087 | Soybean | nucleus | 8.72 | 14.94 |
| KRH12909 | Soybean | nucleus | 12.46 | 14.74 |
| KRH37912 | Soybean | nucleus | 12.63 | 14.49 |
| KRH71344 | Soybean | cytosol | 0.89 | 6.67 |
Protein Annotations
| EntrezGene:100811345 | MapMan:15.5.32 | MapMan:26.1.1.4 | Gene3D:4.10.280.10 | EMBL:ACUP02008504 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_14G032200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1M718 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH14535 | ProteinID:KRH14535 | ProteinID:KRH14535.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF284 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233C101 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:2338828..2344252
Molecular Weight (calculated)
62108.5 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.821
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNSIPGLDF ESDACLTNQR KLIGPDQELV ELLWQNGQVV RHNQTHRKPL GNSSNLRQAQ KTDHSTLRSS GPYGNSSNLD QEEATPWIQF PLEDPLEQDF
101: CSNLLSELPP TCEFESYKPI KQLEEDKFTN FFASSTPHHP TTSSSKPLPP NMTSSWVQRI QGNPNPMPAP RFHVPDSSQK DNDLGASRKV LNFPHFSTPR
201: NNVSSAPGST QFREKTTANL SQSEAREYSV ITVGSSHCGS SHIPQEKDVS RVSSSAVWAT NNNNSLSAEP EAVRDCVQRP ICPRSDKGKS EMIEPTVTSS
301: SGGSGSTGIG RTCSLSTRDH GQKRKGTEEE ASEEQSEATE LKSADGNKAS QRTGSSKRNR AAEVHNQSER RRRDRINEKM RTLQQLIPNS NKTDKASMLE
401: EAIEYLKSLQ FQLQVMWMGS GMTPVMFPGI QHYMSQMGMG MGAPSLPSIY NPMQLPKVPH DQAMSVPQMP NQNLMCQNQV LGAFNYQTHM QNPCLPEQYA
501: PYMGYHFMRS ASQPMNVFRY GSQAVQHSQT MIAPGNNSSG PMSGTANIDD AVSGKAGSST FN
101: CSNLLSELPP TCEFESYKPI KQLEEDKFTN FFASSTPHHP TTSSSKPLPP NMTSSWVQRI QGNPNPMPAP RFHVPDSSQK DNDLGASRKV LNFPHFSTPR
201: NNVSSAPGST QFREKTTANL SQSEAREYSV ITVGSSHCGS SHIPQEKDVS RVSSSAVWAT NNNNSLSAEP EAVRDCVQRP ICPRSDKGKS EMIEPTVTSS
301: SGGSGSTGIG RTCSLSTRDH GQKRKGTEEE ASEEQSEATE LKSADGNKAS QRTGSSKRNR AAEVHNQSER RRRDRINEKM RTLQQLIPNS NKTDKASMLE
401: EAIEYLKSLQ FQLQVMWMGS GMTPVMFPGI QHYMSQMGMG MGAPSLPSIY NPMQLPKVPH DQAMSVPQMP NQNLMCQNQV LGAFNYQTHM QNPCLPEQYA
501: PYMGYHFMRS ASQPMNVFRY GSQAVQHSQT MIAPGNNSSG PMSGTANIDD AVSGKAGSST FN
001: MEHQGWSFEE NYSLSTNRRS IRPQDELVEL LWRDGQVVLQ SQTHREQTQT QKQDHHEEAL RSSTFLEDQE TVSWIQYPPD EDPFEPDDFS SHFFSTMDPL
101: QRPTSETVKP KSSPEPPQVM VKPKACPDPP PQVMPPPKFR LTNSSSGIRE TEMEQYSVTT VGPSHCGSNP SQNDLDVSMS HDRSKNIEEK LNPNASSSSG
201: GSSGCSFGKD IKEMASGRCI TTDRKRKRIN HTDESVSLSD AIGNKSNQRS GSNRRSRAAE VHNLSERRRR DRINERMKAL QELIPHCSKT DKASILDEAI
301: DYLKSLQLQL QVMWMGSGMA AAAASAPMMF PGVQPQQFIR QIQSPVQLPR FPVMDQSAIQ NNPGLVCQNP VQNQIISDRF ARYIGGFPHM QAATQPMEML
401: RFSSPAGQQS QQPSSVPTKT TDGSRLDH
101: QRPTSETVKP KSSPEPPQVM VKPKACPDPP PQVMPPPKFR LTNSSSGIRE TEMEQYSVTT VGPSHCGSNP SQNDLDVSMS HDRSKNIEEK LNPNASSSSG
201: GSSGCSFGKD IKEMASGRCI TTDRKRKRIN HTDESVSLSD AIGNKSNQRS GSNRRSRAAE VHNLSERRRR DRINERMKAL QELIPHCSKT DKASILDEAI
301: DYLKSLQLQL QVMWMGSGMA AAAASAPMMF PGVQPQQFIR QIQSPVQLPR FPVMDQSAIQ NNPGLVCQNP VQNQIISDRF ARYIGGFPHM QAATQPMEML
401: RFSSPAGQQS QQPSSVPTKT TDGSRLDH
Arabidopsis Description
PIF4phytochrome interacting factor 4 [Source:TAIR;Acc:AT2G43010]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.