Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P11300_001 | Banana | nucleus | 15.81 | 68.25 |
| TraesCS6A01G190600.1 | Wheat | nucleus | 22.43 | 47.29 |
| KRH28453 | Soybean | nucleus | 48.53 | 45.36 |
| KRH77016 | Soybean | nucleus | 56.99 | 41.33 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 21.69 | 38.56 |
| KRH04711 | Soybean | plastid | 20.96 | 35.62 |
| VIT_07s0031g00450.t01 | Wine grape | nucleus, plastid | 51.47 | 35.53 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 24.26 | 33.5 |
| GSMUA_Achr10P... | Banana | plastid | 40.07 | 31.78 |
| OQU75890 | Sorghum | nucleus | 33.46 | 31.27 |
| KXG31309 | Sorghum | nucleus | 33.09 | 30.82 |
| KRH05665 | Soybean | nucleus | 33.46 | 30.64 |
| TraesCS7A01G126900.1 | Wheat | nucleus | 37.13 | 30.51 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 37.87 | 30.47 |
| KRH15381 | Soybean | nucleus | 33.09 | 30.3 |
| TraesCS7B01G026300.1 | Wheat | nucleus | 37.5 | 30.09 |
| KRH76132 | Soybean | nucleus | 20.22 | 30.05 |
| Os02t0805250-00 | Rice | nucleus | 30.15 | 29.29 |
| TraesCS7D01G124700.1 | Wheat | nucleus | 36.03 | 28.99 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 37.13 | 28.61 |
| KRH72281 | Soybean | nucleus, plastid | 12.5 | 27.2 |
| TraesCS6D01G357700.1 | Wheat | nucleus | 29.41 | 26.94 |
| Zm00001d045212_P001 | Maize | nucleus | 33.09 | 26.55 |
| Zm00001d018416_P001 | Maize | mitochondrion | 31.62 | 26.06 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 28.31 | 26.01 |
| TraesCS6A01G373500.2 | Wheat | nucleus | 27.94 | 25.08 |
| TraesCS6B01G411300.1 | Wheat | nucleus | 27.94 | 25.08 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 15.07 | 22.78 |
| KRH55381 | Soybean | cytosol | 5.51 | 21.74 |
| KRH71345 | Soybean | nucleus | 11.03 | 16.95 |
| KRH32290 | Soybean | nucleus | 30.51 | 16.9 |
| KRH19683 | Soybean | nucleus | 30.51 | 16.31 |
| KRH65412 | Soybean | nucleus | 22.79 | 15.62 |
| KRH67519 | Soybean | nucleus | 28.68 | 15.54 |
| KRH33663 | Soybean | nucleus | 25.37 | 15.37 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 33.46 | 15.19 |
| KRH54630 | Soybean | nucleus | 22.06 | 14.93 |
| KRH32094 | Soybean | nucleus | 14.71 | 14.13 |
| KRH45975 | Soybean | nucleus | 26.84 | 13.9 |
| KRH68348 | Soybean | nucleus | 25.74 | 13.54 |
| KRH67287 | Soybean | nucleus | 14.34 | 13.36 |
| KRG95612 | Soybean | nucleus | 14.34 | 13.36 |
| KRH75301 | Soybean | nucleus | 22.43 | 13.32 |
| KRG92679 | Soybean | nucleus | 16.18 | 13.25 |
| KRH68390 | Soybean | nucleus | 29.78 | 12.98 |
| KRG99030 | Soybean | nucleus | 26.1 | 12.98 |
| KRG96615 | Soybean | nucleus | 24.63 | 12.93 |
| KRG88937 | Soybean | nucleus | 22.06 | 12.9 |
| KRH03075 | Soybean | nucleus | 17.28 | 12.81 |
| KRG96663 | Soybean | nucleus | 29.41 | 12.64 |
| KRH73584 | Soybean | nucleus | 26.1 | 12.63 |
| KRH33733 | Soybean | nucleus | 31.25 | 12.3 |
| KRH14535 | Soybean | nucleus | 25.37 | 12.28 |
| KRG90443 | Soybean | nucleus | 31.99 | 12.05 |
| KRH34087 | Soybean | nucleus | 14.34 | 11.89 |
| KRH12909 | Soybean | nucleus | 18.75 | 10.74 |
| KRH37912 | Soybean | nucleus | 18.75 | 10.41 |
| KRH05051 | Soybean | nucleus | 11.76 | 8.0 |
| KRH71344 | Soybean | cytosol | 1.47 | 5.33 |
Protein Annotations
| EntrezGene:100806962 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02010452 | EnsemblPlantsGene:GLYMA_17G172400 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| UniProt:K7MM49 | EnsemblPlants:KRH04595 | ProteinID:KRH04595 | ProteinID:KRH04595.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF297 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002950470 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:17319988..17323711
Molecular Weight (calculated)
30767.2 Da
IEP (calculated)
6.608
GRAVY (calculated)
-0.740
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSTQDEIS FVLRQFLLRS SVTTHESNDD ARNSMSKTAL PDGISAYKGS SAANVSSLSV AASENETDDF DCESEEEEVP TPPKSIRSRS SSKRNRAAEV
101: HNLSEKRRRS RINEKLKALQ NLIPNSNKTD KASMLDEAIE YLKQLHLKVQ MLSMRNGLSL HTMFFQEGLQ PLQLSQVPRM DSGEESRLIP SNPTASLPMH
201: QENPMHYLSN LPNKLAMADQ QSVPTPSYII NSETSFRLES PIPENIRSFQ LRRFPEMCRE DILQHQHLNA NH
101: HNLSEKRRRS RINEKLKALQ NLIPNSNKTD KASMLDEAIE YLKQLHLKVQ MLSMRNGLSL HTMFFQEGLQ PLQLSQVPRM DSGEESRLIP SNPTASLPMH
201: QENPMHYLSN LPNKLAMADQ QSVPTPSYII NSETSFRLES PIPENIRSFQ LRRFPEMCRE DILQHQHLNA NH
001: MISQREEREE KKQRVMGDKK LISSSSSSSV YDTRINHHLH HPPSSSDEIS QFLRHIFDRS SPLPSYYSPA TTTTTASLIG VHGSGDPHAD NSRSLVSHHP
101: PSDSVLMSKR VGDFSEVLIG GGSGSAAACF GFSGGGNNNN VQGNSSGTRV SSSSVGASGN ETDEYDCESE EGGEAVVDEA PSSKSGPSSR SSSKRCRAAE
201: VHNLSEKRRR SRINEKMKAL QSLIPNSNKT DKASMLDEAI EYLKQLQLQV QMLTMRNGIN LHPLCLPGTT LHPLQLSQIR PPEATNDPLL NHTNQFASTS
301: NAPEMINTVA SSYALEPSIR SHFGPFPLLT SPVEMSREGG LTHPRLNIGH SNANITGEQA LFDGQPDLKD RIT
101: PSDSVLMSKR VGDFSEVLIG GGSGSAAACF GFSGGGNNNN VQGNSSGTRV SSSSVGASGN ETDEYDCESE EGGEAVVDEA PSSKSGPSSR SSSKRCRAAE
201: VHNLSEKRRR SRINEKMKAL QSLIPNSNKT DKASMLDEAI EYLKQLQLQV QMLTMRNGIN LHPLCLPGTT LHPLQLSQIR PPEATNDPLL NHTNQFASTS
301: NAPEMINTVA SSYALEPSIR SHFGPFPLLT SPVEMSREGG LTHPRLNIGH SNANITGEQA LFDGQPDLKD RIT
Arabidopsis Description
SPTSPT [Source:UniProtKB/TrEMBL;Acc:A0A178UVX7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.