Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45975 | Soybean | nucleus | 90.13 | 93.9 |
| KRH73584 | Soybean | nucleus | 69.29 | 67.44 |
| KRH14535 | Soybean | nucleus | 68.56 | 66.73 |
| VIT_12s0028g01110.t01 | Wine grape | nucleus | 51.55 | 50.54 |
| PGSC0003DMT400041156 | Potato | nucleus | 44.24 | 46.81 |
| Solyc07g043580.2.1 | Tomato | nucleus | 42.23 | 46.67 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 12.61 | 45.1 |
| CDY00603 | Canola | nucleus, plastid | 22.12 | 44.16 |
| CDY67566 | Canola | nucleus, plastid | 22.12 | 44.16 |
| Bra000283.1-P | Field mustard | nucleus | 31.99 | 42.37 |
| CDX83509 | Canola | nucleus | 31.63 | 41.89 |
| CDY42809 | Canola | nucleus | 31.26 | 41.3 |
| CDY30375 | Canola | nucleus | 29.98 | 40.39 |
| Bra037742.1-P | Field mustard | nucleus | 29.98 | 40.39 |
| CDX70453 | Canola | nucleus | 29.62 | 39.8 |
| CDY29961 | Canola | nucleus | 29.62 | 39.8 |
| CDY14866 | Canola | nucleus | 28.52 | 38.71 |
| Bra007430.1-P | Field mustard | nucleus | 29.98 | 38.5 |
| CDX71916 | Canola | nucleus | 31.08 | 38.37 |
| AT2G43010.5 | Thale cress | extracellular, vacuole | 33.09 | 38.35 |
| CDY06026 | Canola | nucleus | 30.9 | 38.24 |
| AT3G59060.2 | Thale cress | nucleus | 30.9 | 38.06 |
| HORVU5Hr1G102240.3 | Barley | nucleus | 27.24 | 37.63 |
| TraesCS5B01G422000.1 | Wheat | nucleus | 27.79 | 37.07 |
| Os03t0782500-01 | Rice | nucleus | 27.61 | 36.83 |
| TraesCS5D01G428400.2 | Wheat | nucleus | 27.97 | 36.6 |
| KRH04711 | Soybean | plastid | 10.6 | 36.25 |
| TraesCS2B01G273500.1 | Wheat | nucleus | 22.85 | 34.92 |
| TraesCS5A01G420200.1 | Wheat | nucleus | 26.69 | 34.76 |
| Zm00001d034298_P001 | Maize | nucleus | 26.69 | 34.6 |
| TraesCS2A01G253900.2 | Wheat | nucleus | 22.49 | 34.36 |
| HORVU2Hr1G060680.1 | Barley | nucleus | 22.3 | 33.7 |
| KRH72281 | Soybean | nucleus, plastid | 7.5 | 32.8 |
| KRH76132 | Soybean | nucleus | 10.97 | 32.79 |
| Os07t0143200-01 | Rice | nucleus | 24.31 | 32.13 |
| OQU88421 | Sorghum | nucleus | 23.95 | 31.72 |
| Zm00001d013130_P001 | Maize | nucleus | 21.94 | 31.01 |
| KRH32290 | Soybean | nucleus | 27.24 | 30.35 |
| KRH19683 | Soybean | nucleus | 27.79 | 29.86 |
| TraesCS2D01G254400.3 | Wheat | nucleus | 23.22 | 29.53 |
| KRH67519 | Soybean | nucleus | 26.69 | 29.08 |
| KRH04595 | Soybean | nucleus | 12.98 | 26.1 |
| KRH55381 | Soybean | cytosol | 3.29 | 26.09 |
| KRH28453 | Soybean | nucleus | 13.35 | 25.09 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 8.23 | 25.0 |
| KRH15381 | Soybean | nucleus | 12.98 | 23.91 |
| KRH05665 | Soybean | nucleus | 12.8 | 23.57 |
| KRH77016 | Soybean | nucleus | 16.09 | 23.47 |
| KRH33663 | Soybean | nucleus | 18.28 | 22.27 |
| KRH54630 | Soybean | nucleus | 16.09 | 21.89 |
| KRH68348 | Soybean | nucleus | 20.29 | 21.47 |
| KRG88937 | Soybean | nucleus | 18.1 | 21.29 |
| KRH65412 | Soybean | nucleus | 15.36 | 21.16 |
| KRH71345 | Soybean | nucleus | 6.76 | 20.9 |
| KRH75301 | Soybean | nucleus | 17.18 | 20.52 |
| KXG37432 | Sorghum | plastid | 17.92 | 20.33 |
| KRG96615 | Soybean | nucleus | 19.2 | 20.27 |
| KRH68390 | Soybean | nucleus | 22.3 | 19.55 |
| KRH33733 | Soybean | nucleus | 24.5 | 19.39 |
| KRG96663 | Soybean | nucleus | 22.3 | 19.27 |
| KRG90443 | Soybean | nucleus | 25.05 | 18.98 |
| KRH03075 | Soybean | nucleus | 12.25 | 18.26 |
| KRH32094 | Soybean | nucleus | 9.14 | 17.67 |
| KRH05051 | Soybean | nucleus | 12.8 | 17.5 |
| KRG95612 | Soybean | nucleus | 8.96 | 16.78 |
| KRH67287 | Soybean | nucleus | 8.78 | 16.44 |
| KRH34087 | Soybean | nucleus | 9.51 | 15.85 |
| KRH12909 | Soybean | nucleus | 13.35 | 15.37 |
| KRG92679 | Soybean | nucleus | 9.32 | 15.36 |
| KRH37912 | Soybean | nucleus | 13.53 | 15.1 |
| KRH71344 | Soybean | cytosol | 0.73 | 5.33 |
Protein Annotations
| EntrezGene:100784531 | MapMan:15.5.32 | MapMan:26.1.1.4 | Gene3D:4.10.280.10 | UniProt:A0A0R0EZ65 | EMBL:ACUP02010955 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_18G115700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRG99030 | ProteinID:KRG99030 | ProteinID:KRG99030.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF284 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0003DEA779 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:14099161..14105084
Molecular Weight (calculated)
60530.0 Da
IEP (calculated)
7.061
GRAVY (calculated)
-0.736
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNSVPDWNF GSDSCVTTTN QKKPMIGVDQ ELVELQWQNG QVVMHSQTHR KPFVNSITPR PLRRNFQSTL RTSEPFGNSS NLIQDDETVS WIQYPLEDPL
101: EQEFCSNLLS ELAPCEVESY KQIKPFEEGK FTKLDASSTP HVTETSQSPT MKSSSFQEFS GIPIPAPRFH VSDSPQKNNN DLGGSCKVQN FSHFSAPLNV
201: SSASANAHFR DKITGNMSKN EIRECSLMTV GSSYCGSNHI PQDPDASRAS SNGVWTTTLS AEPEAVRDHV PRTSPQNEKG KSEMLEPTTT SSSGGSGSSL
301: GKNCSLSTRN QGQKRKGIDV EESEEQSEDT ELKSALGNKS SQRAGLARRN RAAEVHNLSE RRRRDRINEK MKALQQLIPH SSKTDKASML EEAIEYLKSL
401: QLQLQLMWMG SGMAPIMFPG IQHYMSQMGM GMATPPFPPI HNPMQLPRLP LDQSVSASQT PNQTLMSQNP ILGAFNYHNQ MQNPALSEQY ARYMGYHLMQ
501: NASQPMNVFR YGPQGVRHSQ TMITPSNSSG NMSGAANIDE AVSGKMG
101: EQEFCSNLLS ELAPCEVESY KQIKPFEEGK FTKLDASSTP HVTETSQSPT MKSSSFQEFS GIPIPAPRFH VSDSPQKNNN DLGGSCKVQN FSHFSAPLNV
201: SSASANAHFR DKITGNMSKN EIRECSLMTV GSSYCGSNHI PQDPDASRAS SNGVWTTTLS AEPEAVRDHV PRTSPQNEKG KSEMLEPTTT SSSGGSGSSL
301: GKNCSLSTRN QGQKRKGIDV EESEEQSEDT ELKSALGNKS SQRAGLARRN RAAEVHNLSE RRRRDRINEK MKALQQLIPH SSKTDKASML EEAIEYLKSL
401: QLQLQLMWMG SGMAPIMFPG IQHYMSQMGM GMATPPFPPI HNPMQLPRLP LDQSVSASQT PNQTLMSQNP ILGAFNYHNQ MQNPALSEQY ARYMGYHLMQ
501: NASQPMNVFR YGPQGVRHSQ TMITPSNSSG NMSGAANIDE AVSGKMG
001: MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPDDVI
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQMQTVQ QQPADMLGFG SPAGPQSQLS APATTDSLHM GKIG
101: DPFESEFSSH FFSSIDHLGG PEKPRTIEET VKHEAQAMAP PKFRSSVITV GPSHCGSNQS TNIHQATTLP VSMSDRSKNV EERLDTSSGG SSGCSYGRNN
201: KETVSGTSVT IDRKRKHVMD ADQESVSQSD IGLTSTDDQT MGNKSSQRSG STRRSRAAEV HNLSERRRRD RINERMKALQ ELIPHCSRTD KASILDEAID
301: YLKSLQMQLQ VMWMGSGMAA AAAAAASPMM FPGVQSSPYI NQMAMQSQMQ LSQFPVMNRS APQNHPGLVC QNPVQLQLQA QNQILSEQLA RYMGGIPQMP
401: PAGNQMQTVQ QQPADMLGFG SPAGPQSQLS APATTDSLHM GKIG
Arabidopsis Description
PIF5Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.