Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28453 | Soybean | nucleus | 64.53 | 83.16 |
| GSMUA_Achr9P11300_001 | Banana | nucleus | 13.07 | 77.78 |
| KRH04595 | Soybean | nucleus | 41.33 | 56.99 |
| TraesCS6A01G190600.1 | Wheat | nucleus | 17.33 | 50.39 |
| VIT_07s0031g00450.t01 | Wine grape | nucleus, plastid | 49.33 | 46.95 |
| KRH71636 | Soybean | golgi, plasma membrane, vacuole | 17.33 | 42.48 |
| KRH04711 | Soybean | plastid | 16.53 | 38.75 |
| Os06t0164400-01 | Rice | cytosol, mitochondrion, nucleus | 19.2 | 36.55 |
| OQU75890 | Sorghum | nucleus | 26.67 | 34.36 |
| KRH15381 | Soybean | nucleus | 26.93 | 34.01 |
| KRH05665 | Soybean | nucleus | 26.93 | 34.01 |
| TraesCS7A01G126900.1 | Wheat | nucleus | 29.07 | 32.93 |
| Os02t0805250-00 | Rice | nucleus | 24.53 | 32.86 |
| GSMUA_Achr8P15670_001 | Banana | nucleus | 30.67 | 32.58 |
| HORVU7Hr1G026560.2 | Barley | nucleus | 29.07 | 32.25 |
| KXG31309 | Sorghum | nucleus | 25.07 | 32.19 |
| GSMUA_Achr10P... | Banana | plastid | 29.33 | 32.07 |
| KRH72281 | Soybean | nucleus, plastid | 10.67 | 32.0 |
| TraesCS7D01G124700.1 | Wheat | nucleus | 28.53 | 31.66 |
| TraesCS7B01G026300.1 | Wheat | nucleus | 28.53 | 31.56 |
| Zm00001d045212_P001 | Maize | nucleus | 27.47 | 30.38 |
| KRH76132 | Soybean | nucleus | 14.67 | 30.05 |
| HORVU6Hr1G088020.4 | Barley | nucleus | 22.93 | 29.05 |
| TraesCS6D01G357700.1 | Wheat | nucleus | 22.4 | 28.28 |
| TraesCS6A01G373500.2 | Wheat | nucleus | 22.67 | 28.05 |
| TraesCS6B01G411300.1 | Wheat | nucleus | 22.67 | 28.05 |
| Zm00001d018416_P001 | Maize | mitochondrion | 24.27 | 27.58 |
| KRH69138 | Soybean | cytosol, nucleus, vacuole | 11.47 | 23.89 |
| KRH55381 | Soybean | cytosol | 4.0 | 21.74 |
| KRH32290 | Soybean | nucleus | 24.8 | 18.94 |
| KRH71345 | Soybean | nucleus | 8.8 | 18.64 |
| KRH19683 | Soybean | nucleus | 25.07 | 18.47 |
| KRH67519 | Soybean | nucleus | 23.47 | 17.53 |
| KRH33663 | Soybean | nucleus | 20.8 | 17.37 |
| KRH54630 | Soybean | nucleus | 18.4 | 17.16 |
| KRH45975 | Soybean | nucleus | 23.73 | 16.95 |
| KRH65412 | Soybean | nucleus | 17.87 | 16.88 |
| GSMUA_Achr7P20810_001 | Banana | nucleus | 26.13 | 16.36 |
| KRH03075 | Soybean | nucleus | 16.0 | 16.35 |
| KRH75301 | Soybean | nucleus | 19.73 | 16.16 |
| KRG99030 | Soybean | nucleus | 23.47 | 16.09 |
| KRG88937 | Soybean | nucleus | 19.73 | 15.91 |
| KRH32094 | Soybean | nucleus | 12.0 | 15.9 |
| KRH73584 | Soybean | nucleus | 23.47 | 15.66 |
| KRH14535 | Soybean | nucleus | 22.67 | 15.12 |
| KRG95612 | Soybean | nucleus | 11.73 | 15.07 |
| KRG92679 | Soybean | nucleus | 13.33 | 15.06 |
| KRH68348 | Soybean | nucleus | 20.53 | 14.89 |
| KRH33733 | Soybean | nucleus | 27.2 | 14.76 |
| KRH67287 | Soybean | nucleus | 11.47 | 14.73 |
| KRH34087 | Soybean | nucleus | 12.8 | 14.63 |
| KRG96615 | Soybean | nucleus | 20.0 | 14.48 |
| KRG90443 | Soybean | nucleus | 26.93 | 13.99 |
| KRH12909 | Soybean | nucleus | 17.33 | 13.68 |
| KRH68390 | Soybean | nucleus | 22.13 | 13.3 |
| KRG96663 | Soybean | nucleus | 21.87 | 12.95 |
| KRH37912 | Soybean | nucleus | 16.8 | 12.86 |
| KRH05051 | Soybean | nucleus | 10.4 | 9.75 |
| KRH71344 | Soybean | cytosol | 1.33 | 6.67 |
Protein Annotations
| EntrezGene:100797351 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02000652 | ncoils:Coil | EnsemblPlantsGene:GLYMA_01G187600 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7K4M4 | EnsemblPlants:KRH77016 | ProteinID:KRH77016 | ProteinID:KRH77016.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF284 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00023377C8 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:52272210..52275619
Molecular Weight (calculated)
40906.7 Da
IEP (calculated)
5.807
GRAVY (calculated)
-0.662
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDMYHFDKN LSSQDEISLF LRQILLRSSP PSSSSSSRPM PTVSCTSNVA HQNVNAHPSF TASQLQDGKI LALDSTASFA SGSAACSPFK GQGASAANVS
101: SSSAGVSENE NDDYDCESEE GVEALAEEVP TKAASSRSSS KRSRAAEVHN LSEKRRRSRI NEKMKALQNL IPNSNKTDKA SMLDEAIEYL KQLQLQVQML
201: SMRNGLSLHP MCFPDGLQPL QLSQMGMELS ERNRSTPLKM SATLPLHQDN NPLHYASNQP CVPYPPYINN PETSFGLEPR IQPDTKPLQH KEGSSEPIRG
301: EDILQYQQSS AIHSDTNTLG GSQVVKEFDS GTTLSFPFDT QACEPKDNNS LQPCIGGRDH SGVMIRNSET NIVGR
101: SSSAGVSENE NDDYDCESEE GVEALAEEVP TKAASSRSSS KRSRAAEVHN LSEKRRRSRI NEKMKALQNL IPNSNKTDKA SMLDEAIEYL KQLQLQVQML
201: SMRNGLSLHP MCFPDGLQPL QLSQMGMELS ERNRSTPLKM SATLPLHQDN NPLHYASNQP CVPYPPYINN PETSFGLEPR IQPDTKPLQH KEGSSEPIRG
301: EDILQYQQSS AIHSDTNTLG GSQVVKEFDS GTTLSFPFDT QACEPKDNNS LQPCIGGRDH SGVMIRNSET NIVGR
001: MISQREEREE KKQRVMGDKK LISSSSSSSV YDTRINHHLH HPPSSSDEIS QFLRHIFDRS SPLPSYYSPA TTTTTASLIG VHGSGDPHAD NSRSLVSHHP
101: PSDSVLMSKR VGDFSEVLIG GGSGSAAACF GFSGGGNNNN VQGNSSGTRV SSSSVGASGN ETDEYDCESE EGGEAVVDEA PSSKSGPSSR SSSKRCRAAE
201: VHNLSEKRRR SRINEKMKAL QSLIPNSNKT DKASMLDEAI EYLKQLQLQV QMLTMRNGIN LHPLCLPGTT LHPLQLSQIR PPEATNDPLL NHTNQFASTS
301: NAPEMINTVA SSYALEPSIR SHFGPFPLLT SPVEMSREGG LTHPRLNIGH SNANITGEQA LFDGQPDLKD RIT
101: PSDSVLMSKR VGDFSEVLIG GGSGSAAACF GFSGGGNNNN VQGNSSGTRV SSSSVGASGN ETDEYDCESE EGGEAVVDEA PSSKSGPSSR SSSKRCRAAE
201: VHNLSEKRRR SRINEKMKAL QSLIPNSNKT DKASMLDEAI EYLKQLQLQV QMLTMRNGIN LHPLCLPGTT LHPLQLSQIR PPEATNDPLL NHTNQFASTS
301: NAPEMINTVA SSYALEPSIR SHFGPFPLLT SPVEMSREGG LTHPRLNIGH SNANITGEQA LFDGQPDLKD RIT
Arabidopsis Description
SPTSPT [Source:UniProtKB/TrEMBL;Acc:A0A178UVX7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.