CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92679	Soybean	nucleus	92.68	91.57
Os07t0182200-01	Rice	cytosol	28.96	69.85
KRH71344	Soybean	cytosol	14.63	64.0
KRH55381	Soybean	cytosol	13.41	63.77
VIT_14s0030g02230.t01	Wine grape	nucleus	63.11	62.54
OQU88567	Sorghum	nucleus	49.09	58.12
KRH32094	Soybean	nucleus	49.7	57.6
KRG95612	Soybean	nucleus	50.61	56.85
GSMUA_Achr5P03100_001	Banana	nucleus	47.26	56.57
Zm00001d018967_P001	Maize	nucleus	48.78	56.14
KRH67287	Soybean	nucleus	49.7	55.82
Zm00001d013073_P002	Maize	nucleus	48.48	55.79
KXG37359	Sorghum	nucleus	47.87	55.28
TraesCS5D01G449200.1	Wheat	nucleus	46.65	54.45
TraesCS5B01G445900.1	Wheat	nucleus	46.65	54.45
GSMUA_Achr4P21070_001	Banana	nucleus	49.7	54.33
Os03t0797600-01	Rice	nucleus	47.87	53.4
TraesCS5A01G441900.1	Wheat	nucleus	45.73	53.38
KRH72281	Soybean	nucleus, plastid	20.12	52.8
KRH71345	Soybean	nucleus	27.44	50.85
GSMUA_Achr9P25560_001	Banana	nucleus	52.44	48.73
HORVU5Hr1G106310.3	Barley	nucleus	45.43	47.76
KRH03075	Soybean	nucleus	40.85	36.51
KRH12909	Soybean	nucleus	44.21	30.53
KRH37912	Soybean	nucleus	44.21	29.59
KRH71636	Soybean	golgi, plasma membrane, vacuole	12.8	27.45
KRH04711	Soybean	plastid	10.67	21.88
KRH76132	Soybean	nucleus	11.59	20.77
KRH28453	Soybean	nucleus	13.41	15.12
KRH69138	Soybean	cytosol, nucleus, vacuole	7.93	14.44
KRH04595	Soybean	nucleus	11.89	14.34
KRH05665	Soybean	nucleus	12.8	14.14
KRH15381	Soybean	nucleus	12.5	13.8
KRH77016	Soybean	nucleus	14.63	12.8
KRH32290	Soybean	nucleus	18.9	12.63
KRH67519	Soybean	nucleus	18.9	12.35
KRH19683	Soybean	nucleus	18.9	12.18
KRH65412	Soybean	nucleus	13.72	11.34
KRH45975	Soybean	nucleus	16.16	10.1
KRH68348	Soybean	nucleus	15.85	10.06
KRH54630	Soybean	nucleus	12.2	9.95
KRG88937	Soybean	nucleus	14.02	9.89
KRH75301	Soybean	nucleus	13.41	9.61
KRG99030	Soybean	nucleus	15.85	9.51
KRG96615	Soybean	nucleus	14.63	9.27
KRH33663	Soybean	nucleus	12.5	9.13
KRH73584	Soybean	nucleus	15.24	8.9
KRH14535	Soybean	nucleus	14.94	8.72
KRH33733	Soybean	nucleus	17.07	8.1
KRH68390	Soybean	nucleus	15.24	8.01
KRG90443	Soybean	nucleus	16.46	7.48
KRG96663	Soybean	nucleus	14.02	7.27
KRH05051	Soybean	nucleus	4.88	4.0

Protein Annotations

EntrezGene:100781299	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02006577	EnsemblPlantsGene:GLYMA_10G162300	GO:GO:0001046
GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	UniProt:I1LBL6	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH34087
ProteinID:KRH34087	ProteinID:KRH34087.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF15
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000233CC58	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:39649978..39654979

Molecular Weight (calculated)

35786.5 Da

IEP (calculated)

6.660

GRAVY (calculated)

-0.370

Length

328 amino acids

Sequence
(BLAST)

001: MAGNSSSEGL VDDFFEQILA VPEAAAFRGA AGLMPLGLNL EQAGFLRHQH QINVDDVVHV NVDDATIHHH HLTLHNNTTS SSPSSTAPIT QDRDSMHMRG
101: LFSAFGQLHT PTLAHSIRPT LPSPPPPRQP QLHLHHHNNQ QFQGQPAAAP ASMAAMPQPP GIRPRVRARR GQATDPHSIA ERLRRERIAE RMKALQELVP
201: SINKTDRAAM LDEIVDYVKF LRLQVKVLSM SRLGGAGAVA QLVADVPLSA VEGDQDIEGV SNEQAWDKWS NDGTEQQVAK LMEEDVGAAM QFLQSKALCI
301: MPISLASSIF RMPQSEASTG IKPESNSH

Best Arabidopsis Sequence Match ( AT1G03040.1 )
(BLAST)

001: MANNNNIPHD SISDPSPTDD FFEQILGLSN FSGSSGSGLS GIGGVGPPPM MLQLGSGNEG NHNHMGAIGG GGPVGFHNQM FPLGLSLDQG KGHGFLKPDE
101: TGKRFQDDVL DNRCSSMKPI FHGQPMSQPA PPMPHQQSTI RPRVRARRGQ ATDPHSIAER LRRERIAERI RSLQELVPTV NKTDRAAMID EIVDYVKFLR
201: LQVKVLSMSR LGGAGAVAPL VTEMPLSSSV EDETQAVWEK WSNDGTERQV AKLMEENVGA AMQLLQSKAL CIMPISLAMA IYHSQPPDTS SSIVKPEMNP
301: PP

Arabidopsis Description

basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT1G03040]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.