CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG93695
KRG94592
KRH01133
KRH01571
KRH03461
KRH06898
KRH14475
KRH21929
KRH21930
KRH21931
KRH26162
KRH39622
KRH40128
KRH44917
KRH49908
KRH55034
KRH56921
KRH70543
KRH73670
KRH74300

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02590.1	KRH44917	AT1G22630.1	21798944
AT4G02590.1	KRH21929	AT1G78680.1	21798944
AT4G02590.1	KRH21930	AT1G78680.1	21798944
AT4G02590.1	KRH21931	AT1G78680.1	21798944
AT4G02590.1	KRH26162	AT2G24020.1	21798944
AT4G02590.1	KRH55034	AT2G24020.1	21798944
AT4G02590.1	KRH14475	AT2G42870.1	21798944
AT4G02590.1	KRH73670	AT2G42870.1	21798944
AT4G02590.1	KRH01133	AT3G28715.1	21798944
AT4G02590.1	KRH40128	AT3G28715.1	21798944
AT4G02590.1	KRH03461	AT3G47640.1	21798944
AT4G02590.1	KRH56921	AT3G47640.1	21798944
AT4G02590.1	KRH49908	AT4G25315.1	21798944
AT4G02590.1	KRG94592	AT5G14070.1	21798944
AT4G02590.1	KRH01571	AT5G14070.1	21798944
AT4G02590.1	KRH06898	AT5G14070.1	21798944
AT4G02590.1	KRH70543	AT5G14070.1	21798944
AT4G02590.1	KRG93695	AT5G15802.1	21798944
AT4G02590.1	KRH39622	AT5G45620.1	21798944
AT4G02590.1	KRH74300	AT5G45620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71344	Soybean	cytosol	25.09	94.67
KRH71345	Soybean	nucleus	58.3	93.22
KRG95612	Soybean	nucleus	87.63	84.93
KRH67287	Soybean	nucleus	85.87	83.22
KRH55381	Soybean	cytosol	20.14	82.61
Bra036256.1-P	Field mustard	nucleus	63.6	78.95
VIT_07s0141g00220.t01	Wine grape	nucleus	77.74	76.12
Os07t0182200-01	Rice	cytosol	36.04	75.0
Solyc09g065820.2.1	Tomato	nucleus	76.33	71.52
Bra018539.1-P	Field mustard	nucleus	63.96	71.26
PGSC0003DMT400049768	Potato	nucleus	75.97	71.19
CDX91293	Canola	nucleus	71.73	68.12
CDY21898	Canola	nucleus	72.44	68.11
CDY22062	Canola	nucleus	72.79	67.76
AT4G02590.1	Thale cress	nucleus	74.2	67.74
CDY18143	Canola	nucleus	71.38	66.01
CDX97278	Canola	nucleus	69.26	65.55
CDY18011	Canola	nucleus	70.32	65.46
Bra033368.1-P	Field mustard	nucleus	71.02	64.63
CDX89919	Canola	nucleus	71.02	64.63
CDX90930	Canola	nucleus	70.32	64.19
Bra000872.1-P	Field mustard	nucleus	69.96	64.08
AT1G03040.3	Thale cress	nucleus	71.38	60.66
GSMUA_Achr4P21070_001	Banana	nucleus	61.13	57.67
Zm00001d013073_P002	Maize	nucleus	57.6	57.19
OQU88567	Sorghum	nucleus	55.83	57.04
KXG37359	Sorghum	nucleus	56.89	56.69
TraesCS5B01G445900.1	Wheat	nucleus	56.18	56.58
TraesCS5D01G449200.1	Wheat	nucleus	56.18	56.58
GSMUA_Achr5P03100_001	Banana	nucleus	54.77	56.57
Os03t0797600-01	Rice	nucleus	58.3	56.12
Zm00001d018967_P001	Maize	nucleus	55.83	55.44
TraesCS5A01G441900.1	Wheat	nucleus	53.0	53.38
HORVU5Hr1G106310.3	Barley	nucleus	55.48	50.32
KRG92679	Soybean	nucleus	58.66	50.0
KRH34087	Soybean	nucleus	57.6	49.7
KRH72281	Soybean	nucleus, plastid	21.55	48.8
GSMUA_Achr9P25560_001	Banana	nucleus	60.07	48.16
KRH03075	Soybean	nucleus	45.94	35.42
KRH12909	Soybean	nucleus	49.47	29.47
KRH37912	Soybean	nucleus	49.12	28.37
KRH71636	Soybean	golgi, plasma membrane, vacuole	15.19	28.1
KRH04711	Soybean	plastid	12.37	21.88
KRH76132	Soybean	nucleus	12.72	19.67
KRH05665	Soybean	nucleus	15.9	15.15
KRH15381	Soybean	nucleus	15.9	15.15
KRH28453	Soybean	nucleus	15.55	15.12
KRH69138	Soybean	cytosol, nucleus, vacuole	9.54	15.0
KRH04595	Soybean	nucleus	14.13	14.71
KRH32290	Soybean	nucleus	21.55	12.42
KRH77016	Soybean	nucleus	15.9	12.0
KRH67519	Soybean	nucleus	21.2	11.95
KRH19683	Soybean	nucleus	20.85	11.59
KRH65412	Soybean	nucleus	14.49	10.33
KRH45975	Soybean	nucleus	17.67	9.52
KRH68348	Soybean	nucleus	17.31	9.48
KRH54630	Soybean	nucleus	13.43	9.45
KRH33663	Soybean	nucleus	14.84	9.35
KRH73584	Soybean	nucleus	18.37	9.25
KRG99030	Soybean	nucleus	17.67	9.14
KRG88937	Soybean	nucleus	14.84	9.03
KRH14535	Soybean	nucleus	17.67	8.9
KRH75301	Soybean	nucleus	13.78	8.52
KRG96615	Soybean	nucleus	15.55	8.49
KRH33733	Soybean	nucleus	19.08	7.81
KRG90443	Soybean	nucleus	19.79	7.76
KRH68390	Soybean	nucleus	15.55	7.05
KRG96663	Soybean	nucleus	15.55	6.95
KRH05051	Soybean	nucleus	3.53	2.5

Protein Annotations

EntrezGene:100793177	MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A0R0HNQ2	EMBL:ACUP02006095	EnsemblPlantsGene:GLYMA_10G031600
GO:GO:0001046	GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH32094
ProteinID:KRH32094	ProteinID:KRH32094.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF15
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000189D5CD	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:2754135..2759010

Molecular Weight (calculated)

30562.3 Da

IEP (calculated)

6.405

GRAVY (calculated)

-0.373

Length

283 amino acids

Sequence
(BLAST)

001: MANHPSEAPT DDFLEQILGL STFASADPAA DASPMMLQLN SGDAATHLAA THLAAFHAPP YQLGLSLDQG KGPFLTPEDA SGSGKRFRDD VVDTRPKNFF
101: HGQPMPTTVP TAPHPPAVRP RVRARRGQAT DPHSIAERLR RERIAERIRA LQELVPSVNK TDRAAMLDEI VDYVKFLRLQ VKVLSMSRLG GAGAVAPLVT
201: DIPLSSVEEE GGEGRNQPAW EKWSNDGTER QVAKLMEENV GAAMQFLQSK ALCIMPVSLA SAIYQSQPSG TSSIVKPETN PPS

Best Arabidopsis Sequence Match ( AT4G02590.2 )
(BLAST)

001: MASNNPHDNL SDQTPSDDFF EQILGLPNFS ASSAAGLSGV DGGLGGGAPP MMLQLGSGEE GSHMGGLGGS GPTGFHNQMF PLGLSLDQGK GPGFLRPEGG
101: HGSGKRFSDD VVDNRCSSMK PVFHGQPMQQ PPPSAPHQPT SIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP TVNKTDRAAM IDEIVDYVKF
201: LRLQVKVLSM SRLGGAGAVA PLVTDMPLSS SVEDETGEGG RTPQPAWEKW SNDGTERQVA KLMEENVGAA MQLLQSKALC MMPISLAMAI YHSQPPDTSS
301: VVKPENNPPQ

Arabidopsis Description

UNE12Transcription factor UNE12 [Source:UniProtKB/Swiss-Prot;Acc:O22768]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.