CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78307	Sorghum	cytosol	49.14	48.59
CDX88462	Canola	cytosol	21.14	47.44
Zm00001d028402_P001	Maize	mitochondrion	15.43	44.26
CDX87443	Canola	extracellular	53.71	31.97
KRH21931	Soybean	extracellular	57.71	29.53
Bra035056.1-P	Field mustard	extracellular	54.29	27.7
AT1G78660.1	Thale cress	peroxisome	54.86	27.59
AT1G78670.1	Thale cress	extracellular	54.86	27.27
CDY14595	Canola	plasma membrane	53.14	27.03
CDY26875	Canola	plasma membrane	53.14	27.03
Bra008376.1-P	Field mustard	plasma membrane	53.14	27.03
VIT_19s0014g00980.t01	Wine grape	plastid	58.86	26.82
AT1G78680.1	Thale cress	extracellular	53.14	26.8
PGSC0003DMT400018204	Potato	vacuole	52.0	26.76
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.86	26.57
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	50.86	26.57
TraesCS1A01G338300.1	Wheat	golgi	50.86	26.49
Solyc07g062270.2.1	Tomato	vacuole	51.43	26.47
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.0	26.45
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	52.0	26.45
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	50.29	26.11
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.29	26.11
GSMUA_Achr6P31760_001	Banana	plasma membrane	53.71	26.11
PGSC0003DMT400054757	Potato	cytosol	48.57	26.07
CDX88464	Canola	extracellular, plasma membrane, vacuole	50.86	25.87
Os05t0517500-01	Rice	plasma membrane	49.71	25.82
Zm00001d010744_P001	Maize	extracellular	50.29	25.73
EES19816	Sorghum	endoplasmic reticulum, extracellular	49.71	25.44
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	50.29	25.43
Solyc10g007410.2.1	Tomato	plasma membrane	49.14	25.0
EES18511	Sorghum	plasma membrane	48.57	23.81
CDX88465	Canola	mitochondrion	12.57	7.69
KRH21929	Soybean	extracellular	1.71	2.13

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	UniProt:A0A0R0GUI6	EMBL:ACUP02008372	InterPro:Class_I_gatase-like
EnsemblPlantsGene:GLYMA_13G267900	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008242	GO:GO:0016787	GO:GO:0019538	InterPro:IPR015527	InterPro:IPR029062	EnsemblPlants:KRH21930
ProteinID:KRH21930	ProteinID:KRH21930.1	PFscan:PS51275	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0	MetaCyc:PWY-2161B
MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112	InterPro:Pept_C26_g-glut_hydrolase	SUPFAM:SSF52317	UniParc:UPI0006EDCBBA

Description

hypothetical protein

Coordinates

chr13:+:37049135..37051046

Molecular Weight (calculated)

19892.3 Da

IEP (calculated)

9.284

GRAVY (calculated)

-0.544

Length

175 amino acids

Sequence
(BLAST)

001: QTDILEPFTA SSLPSSLVLW KEANAKGSLF QRFPSDLLTQ LKTDCLVLHN HRYAISPRKL QYNTKLSDFF EILATSEDRD GKTFVSTARG RKYPVTVNLW
101: QPEKNAFEWA TSLKAPHTED AIRVTQSTAN FFISEARKST NTPDAQKVRD NLIYNYKPTF GGTAGKGYDQ VYLFE

Best Arabidopsis Sequence Match ( AT1G78660.3 )
(BLAST)

001: MIDNNCLYKE ELNRNSYSGL AKEASESILL PSESGFDGSR SPVCSSPDPN LNYRPVIGIL SHPGDGASGR LTNDTSSTYI AASYVKFAEA GGARVIPLIY
101: NEPEEVLFQK LELVNGVIFT GGWAKKYDYF EIVKKIFTKA LERNDAGEHF PVYGICLGFE LMSIIISQNR DILERFDAED NASSLQFVDN VNNDGTLFQR
201: FPPELLKKLS TDCLVMQKHK YGITPANFQA NPALSSFFEI LTTCIDENSK TYVSTVKAKR YPITGFQWHP EKNAFEWGSS AIPHSEDAIQ VTQHAASYLV
301: SEARKSLNRP ESQKVLSNLI YNYKPTYCGY AGRGYDEVYI FTQPRSRF

Arabidopsis Description

GGH1Gamma-glutamyl hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL6]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.