CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21930	Soybean	cytosol	48.59	49.14
CDX88462	Canola	cytosol	20.9	47.44
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	81.92	43.28
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	81.92	43.03
Os05t0517500-01	Rice	plasma membrane	81.92	43.03
TraesCS1A01G338300.1	Wheat	golgi	81.36	42.86
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	80.79	41.33
EES19816	Sorghum	endoplasmic reticulum, extracellular	79.1	40.94
EES18511	Sorghum	plasma membrane	76.84	38.1
PGSC0003DMT400054757	Potato	cytosol	61.58	33.44
KRH21931	Soybean	extracellular	63.28	32.75
CDX87443	Canola	extracellular	54.24	32.65
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	61.58	32.54
GSMUA_Achr6P31760_001	Banana	plasma membrane	65.54	32.22
Solyc10g007410.2.1	Tomato	plasma membrane	62.15	31.98
PGSC0003DMT400018204	Potato	vacuole	61.02	31.76
Solyc07g062270.2.1	Tomato	vacuole	60.45	31.47
VIT_19s0014g00980.t01	Wine grape	plastid	67.23	30.99
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	58.76	30.86
AT1G78660.1	Thale cress	peroxisome	59.89	30.46
AT1G78680.1	Thale cress	extracellular	58.76	29.97
CDY26875	Canola	plasma membrane	57.63	29.65
CDY14595	Canola	plasma membrane	57.63	29.65
Bra008376.1-P	Field mustard	plasma membrane	57.63	29.65
CDX88464	Canola	extracellular, plasma membrane, vacuole	57.06	29.36
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.06	29.36
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	57.06	29.36
Bra035056.1-P	Field mustard	extracellular	55.37	28.57
AT1G78670.1	Thale cress	extracellular	56.5	28.41
CDX88465	Canola	mitochondrion	13.56	8.39
KRH21929	Soybean	extracellular	2.26	2.84

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	UniProt:A0A1Z5R3E7	InterPro:Class_I_gatase-like	InterPro:GATASE
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008242
GO:GO:0016787	GO:GO:0019538	InterPro:IPR015527	InterPro:IPR017926	InterPro:IPR029062	EnsemblPlants:OQU78307
ProteinID:OQU78307	ProteinID:OQU78307.1	ProteinID:OQU78308.1	PFAM:PF00117	PFscan:PS51275	PANTHER:PTHR11315
PANTHER:PTHR11315:SF0	InterPro:Pept_C26_g-glut_hydrolase	EnsemblPlantsGene:SORBI_3009G199001	SUPFAM:SSF52317	UniParc:UPI000B8B9BB8	:

Description

hypothetical protein

Coordinates

chr9:-:54913561..54916693

Molecular Weight (calculated)

20235.8 Da

IEP (calculated)

7.619

GRAVY (calculated)

-0.442

Length

177 amino acids

Sequence
(BLAST)

001: MIVSKDNNIL ESFHALNQTS TLQFPNYSFL KGSVFQRFNP ELIKKLSTDC LVMQNHGYGI SPKRLQENVA LSSFFKILTT SPDENGKVYV STVQAQNYPI
101: ICTQWHPEKA IFEWGEPMNP HSEDAVQVTQ HFANYFVSQA RKSLNRAPAD KVLNNLIDNY SPRFGTSKSF DEVYNFS

Best Arabidopsis Sequence Match ( AT1G78680.1 )
(BLAST)

001: MWSYVWLPLV ALSLFKDSII MAKAATILLP SQTGFDISRS PVCSAPDPNL NYRPVIGILS HPGDGASGRL SNATDASSIA ASYVKLAESG GARVIPLIFN
101: EPEEILFQKL ELVNGVILTG GWAKEGLYFE IVKKIFNKVL ERNDAGEHFP IYAICLGFEL LTMIISQNRD IFEKMDARNS ASSLQFVENV NIQGTIFQRF
201: PPELLKKLGT DCLVMQNHRF GISPQSFEGN IALSNFFKIV TTCVDDNGKV YVSTVQSTKY PVTGFQWHPE KNAFEWGSSK IPHSEDAIQV TQHAANHLVS
301: EARKSLNRPE SKKVLSNLIY NYKPTYCGYA GIGYDEVYIF TQQRSLL

Arabidopsis Description

GGH2Gamma-glutamyl hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65355]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.