Factsheet for VIT_19s0014g00980.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
extracellular 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018204	Potato	vacuole	61.46	69.41
KRH21931	Soybean	extracellular	60.94	68.42
Solyc07g062270.2.1	Tomato	vacuole	60.16	67.94
OQU78307	Sorghum	cytosol	30.99	67.23
PGSC0003DMT400054757	Potato	cytosol	55.47	65.34
AT1G78680.1	Thale cress	extracellular	58.33	64.55
CDX88464	Canola	extracellular, plasma membrane, vacuole	57.29	63.95
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	57.03	63.66
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.03	63.66
AT1G78660.1	Thale cress	peroxisome	57.03	62.93
CDX87443	Canola	extracellular	48.18	62.93
Solyc10g007410.2.1	Tomato	plasma membrane	56.25	62.79
GSMUA_Achr6P31760_001	Banana	plasma membrane	58.59	62.5
CDY26875	Canola	plasma membrane	55.21	61.63
Bra008376.1-P	Field mustard	plasma membrane	55.21	61.63
CDX88462	Canola	cytosol	12.5	61.54
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	53.65	61.49
Os05t0517500-01	Rice	plasma membrane	53.65	61.13
CDY14595	Canola	plasma membrane	54.69	61.05
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	53.39	60.83
AT1G78670.1	Thale cress	extracellular	55.73	60.8
EES19816	Sorghum	endoplasmic reticulum, extracellular	53.91	60.53
Bra035056.1-P	Field mustard	extracellular	53.91	60.35
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.86	60.24
Zm00001d010744_P001	Maize	extracellular	53.65	60.23
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.08	59.7
TraesCS1A01G338300.1	Wheat	golgi	52.08	59.52
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	53.12	58.96
KRH21930	Soybean	cytosol	26.82	58.86
Zm00001d028402_P001	Maize	mitochondrion	9.11	57.38
KRH21929	Soybean	extracellular	17.97	48.94
EES18511	Sorghum	plasma membrane	44.01	47.34
CDX88465	Canola	mitochondrion	13.02	17.48

Protein Annotations

KEGG:00790+3.4.19.9	EntrezGene:100262251	wikigene:100262251	Gene3D:3.40.50.880	MapMan:50.3.4	ProteinID:CCB46229
ProteinID:CCB46229.1	InterPro:Class_I_gatase-like	UniProt:F6H1W5	EMBL:FN595229	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008242	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0034722	GO:GO:0046900	InterPro:IPR015527	InterPro:IPR029062	EntrezGene:LOC100262251	wikigene:LOC100262251
PFAM:PF07722	PFscan:PS51275	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0	InterPro:Pept_C26_g-glut_hydrolase	InterPro:Peptidase_C26
SUPFAM:SSF52317	UniParc:UPI00015C7650	ArrayExpress:VIT_19s0014g00980	EnsemblPlantsGene:VIT_19s0014g00980	EnsemblPlants:VIT_19s0014g00980.t01	unigene:Vvi.3160
RefSeq:XP_002285525	RefSeq:XP_002285525.1	SEG:seg	:	:	:

Description

Gamma-glutamyl hydrolase [Source:UniProtKB/TrEMBL;Acc:F6H1W5]

Coordinates

chr19:+:1024631..1034233

Molecular Weight (calculated)

42287.8 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.217

Length

384 amino acids

Sequence
(BLAST)

001: MPAHFLSSSP SSASTSSTAS PADSSDMPKD AVSASSSSGR YSEIWNYLWV PLLLSVSKEL TAAKAESTIL LPSDVRLGSA RSSPSCPAPD PKLNFRPVVG
101: ILTHPGDGAS GRLNNDTNAS YIAASYVKFV ESAGARVIPL IYNEPLEILH EKLNLVNGVI FTGGWAKSGL YYTTVGEIFK KSLEKNDVGD HFPVLATCLG
201: FELLTMIISK DIKILEEFSA ADQASTLNFM KNTDIRGTVF QRFPPDLLRK LSTDCLVMQN HHYGISPERF QENTDLSSFF KILTTSTDED DKVYVSTAQA
301: HSYPVTAFQW HPEKNAFEWG LSRIPHSEDA VQVTQHVANF FISEARKSLN RPPARKVLDN LIYNYSPTYC GKAGKGYDEV YIFS

Best Arabidopsis Sequence Match ( AT1G78680.1 )
(BLAST)

001: MWSYVWLPLV ALSLFKDSII MAKAATILLP SQTGFDISRS PVCSAPDPNL NYRPVIGILS HPGDGASGRL SNATDASSIA ASYVKLAESG GARVIPLIFN
101: EPEEILFQKL ELVNGVILTG GWAKEGLYFE IVKKIFNKVL ERNDAGEHFP IYAICLGFEL LTMIISQNRD IFEKMDARNS ASSLQFVENV NIQGTIFQRF
201: PPELLKKLGT DCLVMQNHRF GISPQSFEGN IALSNFFKIV TTCVDDNGKV YVSTVQSTKY PVTGFQWHPE KNAFEWGSSK IPHSEDAIQV TQHAANHLVS
301: EARKSLNRPE SKKVLSNLIY NYKPTYCGYA GIGYDEVYIF TQQRSLL

Arabidopsis Description

GGH2Gamma-glutamyl hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65355]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.