Factsheet for Bra035056.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87443	Canola	extracellular	79.59	92.86
AT1G78670.1	Thale cress	extracellular	77.55	75.57
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	66.18	65.99
Bra008376.1-P	Field mustard	plasma membrane	64.43	64.24
PGSC0003DMT400018204	Potato	vacuole	61.81	62.35
KRH21931	Soybean	extracellular	61.22	61.4
Solyc07g062270.2.1	Tomato	vacuole	60.35	60.88
PGSC0003DMT400054757	Potato	cytosol	54.81	57.67
Solyc10g007410.2.1	Tomato	plasma membrane	55.69	55.52
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	54.52	55.49
OQU78307	Sorghum	cytosol	28.57	55.37
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	53.94	55.22
KRH21930	Soybean	cytosol	27.7	54.29
VIT_19s0014g00980.t01	Wine grape	plastid	60.35	53.91
EES19816	Sorghum	endoplasmic reticulum, extracellular	53.06	53.22
Zm00001d010744_P001	Maize	extracellular	52.77	52.92
GSMUA_Achr6P31760_001	Banana	plasma membrane	55.39	52.78
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.6	52.52
Os05t0517500-01	Rice	plasma membrane	51.31	52.23
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.73	51.94
TraesCS1A01G338300.1	Wheat	golgi	50.44	51.49
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	50.44	50.0
KRH21929	Soybean	extracellular	18.95	46.1
Zm00001d028402_P001	Maize	mitochondrion	7.58	42.62
EES18511	Sorghum	plasma membrane	42.27	40.62

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	EnsemblPlantsGene:Bra035056	EnsemblPlants:Bra035056.1	EnsemblPlants:Bra035056.1-P
InterPro:Class_I_gatase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008242
GO:GO:0016787	GO:GO:0019538	GO:GO:0034722	InterPro:IPR015527	InterPro:IPR029062	UniProt:M4F1V9
PFAM:PF07722	PFscan:PS51275	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0	InterPro:Pept_C26_g-glut_hydrolase	InterPro:Peptidase_C26
SUPFAM:SSF52317	SignalP:SignalP-noTM	UniParc:UPI0002541C5B	SEG:seg	:	:

Description

AT1G78670 (E=2e-141) ATGGH3 | ATGGH3 (gamma-glutamyl hydrolase 3); catalytic/ hydrolase/ omega peptidase

Coordinates

chrA07:+:21976691..21978912

Molecular Weight (calculated)

38667.9 Da

IEP (calculated)

6.241

GRAVY (calculated)

-0.198

Length

343 amino acids

Sequence
(BLAST)

001: MWRPLLLLSL LLCNDLTIAK ATESTQLIIL PSQHGDRTCS APDRNLNDKP IIGILTHPGV GTFDAPRDHS LSYYEKNVSY IAASYVKFAE TGGARVIPLI
101: YNEPQERLFQ KLELVNGVIF TGGWAKEGLY FDIVQKIFGK VLEKNDAGEH FPVYAMCLGF EILSMIISQS RDILERFNSV YYASSLQFIE NANIEGTLFQ
201: RFSPELLKKI STDCLVLQNH QFGISPDNFL ANPSLSSFFS ILTTSADKDG KTYVSTIRSK RYPVTAFQWH PEKNAFEWGS SEIPHSEDAI QVTQHAANYL
301: VSEARKSLNR PSHEEVLSNL IYNYKLTYSG YKGSGNDEAY IFT

Best Arabidopsis Sequence Match ( AT1G78670.1 )
(BLAST)

001: MWRFCFFLSL LFFDVSAVKS AESIFLPSQI GVEDSRVFES LSLSPVCSAA DPNLNYKPVI GILTHPGEGR WDARLHSLKN YAYATNISYI AASYVKLAET
101: GGARVIPLIY NEPEEILFQK LELVNGVIFT GGWAKTGLYY DVVEKIFNKV MEKNDAGEHF PVYAMCLGFE ILSMIISQNR DILERFNSVN YASSLQFFKN
201: VNIEATVFQR FPPELLKKLS ADCLVMQNHY FGISPDNFQG NPYLSSFFNI VTTSADKDSK TFVSTIRSKR YPVTAFQWHP EKNAFEWGSS EIPHSEDAIQ
301: VTQHAANYLV SEARKSMNRP SSEKVLSNLI YNYKPTYSGY KGSGDDEVYI FT

Arabidopsis Description

GGH3Probable gamma-glutamyl hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV85]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.