Factsheet for PGSC0003DMT400054757

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
extracellular 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g007410.2.1	Tomato	plasma membrane	92.02	87.21
PGSC0003DMT400018204	Potato	vacuole	75.77	72.65
OQU78307	Sorghum	cytosol	33.44	61.58
KRH21931	Soybean	extracellular	64.42	61.4
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	62.88	61.19
AT1G78680.1	Thale cress	extracellular	63.19	59.37
CDX87443	Canola	extracellular	53.07	58.84
CDX88462	Canola	cytosol	13.8	57.69
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	59.82	56.69
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	59.82	56.69
CDX88464	Canola	extracellular, plasma membrane, vacuole	59.2	56.1
AT1G78660.1	Thale cress	peroxisome	59.82	56.03
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.36	55.49
VIT_19s0014g00980.t01	Wine grape	plastid	65.34	55.47
TraesCS1A01G338300.1	Wheat	golgi	57.06	55.36
Os05t0517500-01	Rice	plasma membrane	57.06	55.19
EES19816	Sorghum	endoplasmic reticulum, extracellular	57.67	54.97
CDY26875	Canola	plasma membrane	57.98	54.94
Bra008376.1-P	Field mustard	plasma membrane	57.98	54.94
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.44	54.93
Bra035056.1-P	Field mustard	extracellular	57.67	54.81
CDY14595	Canola	plasma membrane	57.67	54.65
AT1G78670.1	Thale cress	extracellular	58.9	54.55
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	57.67	54.34
Zm00001d010744_P001	Maize	extracellular	56.44	53.8
GSMUA_Achr6P31760_001	Banana	plasma membrane	59.2	53.61
Zm00001d028402_P001	Maize	mitochondrion	9.51	50.82
KRH21930	Soybean	cytosol	26.07	48.57
KRH21929	Soybean	extracellular	19.02	43.97
EES18511	Sorghum	plasma membrane	46.63	42.58
CDX88465	Canola	mitochondrion	14.11	16.08

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	InterPro:Class_I_gatase-like	GO:GO:0003674	GO:GO:0003824
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008242	GO:GO:0016787	GO:GO:0019538
GO:GO:0034722	InterPro:IPR015527	InterPro:IPR029062	UniProt:M1BWU0	PFAM:PF07722	EnsemblPlantsGene:PGSC0003DMG400021256
PGSC:PGSC0003DMG400021256	EnsemblPlants:PGSC0003DMT400054757	PFscan:PS51275	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0	InterPro:Pept_C26_g-glut_hydrolase
InterPro:Peptidase_C26	SUPFAM:SSF52317	UniParc:UPI000296C9B2	SEG:seg	:	:

Description

Gamma-glutamylhydrolase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400021256]

Coordinates

chr10:-:2480397..2487536

Molecular Weight (calculated)

36285.4 Da

IEP (calculated)

7.678

GRAVY (calculated)

-0.128

Length

326 amino acids

Sequence
(BLAST)

001: MATHVKPQII ESQLNFPSCP ATDPALNYRP VIGIVSHPGD GASGRLNNAS DVSYIAASYV KFAEMAGARV IPIIYTEPPE IINQKLNLVN GIIFTGGWSK
101: KGLYFEVVKG IFEKVLEKND AGEHFPLLAI CLGFELLTMI ISKDNNILEE FSASHQASTV QFVENIKFDG TVFGRFPPVL LKKMSTHCLV MQNHHFGISP
201: ERLQANNDLC GFFRVLTTSV DKKNKVYVSS VQAQHYPVTA LQWHPEKNVF EWGSSQIPHT EDAIQVTQHV ANYFVSEARK SSNNKPATSK VLDNLIYNYS
301: PSYAGKVRGS FEEVYLFTPR PTLSSL

Best Arabidopsis Sequence Match ( AT1G78680.1 )
(BLAST)

001: MWSYVWLPLV ALSLFKDSII MAKAATILLP SQTGFDISRS PVCSAPDPNL NYRPVIGILS HPGDGASGRL SNATDASSIA ASYVKLAESG GARVIPLIFN
101: EPEEILFQKL ELVNGVILTG GWAKEGLYFE IVKKIFNKVL ERNDAGEHFP IYAICLGFEL LTMIISQNRD IFEKMDARNS ASSLQFVENV NIQGTIFQRF
201: PPELLKKLGT DCLVMQNHRF GISPQSFEGN IALSNFFKIV TTCVDDNGKV YVSTVQSTKY PVTGFQWHPE KNAFEWGSSK IPHSEDAIQV TQHAANHLVS
301: EARKSLNRPE SKKVLSNLIY NYKPTYCGYA GIGYDEVYIF TQQRSLL

Arabidopsis Description

GGH2Gamma-glutamyl hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65355]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.