CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88462	Canola	cytosol	4.9	17.95
Zm00001d028402_P001	Maize	mitochondrion	3.5	16.39
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	17.83	15.13
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	17.48	14.93
TraesCS1A01G338300.1	Wheat	golgi	17.48	14.88
GSMUA_Achr6P31760_001	Banana	plasma membrane	18.53	14.72
EES19816	Sorghum	endoplasmic reticulum, extracellular	17.13	14.33
KRH21931	Soybean	extracellular	17.13	14.33
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	17.13	14.16
PGSC0003DMT400054757	Potato	cytosol	16.08	14.11
Os05t0517500-01	Rice	plasma membrane	16.43	13.95
PGSC0003DMT400018204	Potato	vacuole	16.43	13.82
Solyc10g007410.2.1	Tomato	plasma membrane	16.43	13.66
OQU78307	Sorghum	cytosol	8.39	13.56
CDX88464	Canola	extracellular, plasma membrane, vacuole	16.08	13.37
Solyc07g062270.2.1	Tomato	vacuole	15.73	13.24
Zm00001d010744_P001	Maize	extracellular	15.73	13.16
CDY26875	Canola	plasma membrane	15.73	13.08
CDY14595	Canola	plasma membrane	15.73	13.08
VIT_19s0014g00980.t01	Wine grape	plastid	17.48	13.02
CDX87443	Canola	extracellular	13.29	12.93
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	15.04	12.84
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	15.38	12.79
KRH21929	Soybean	extracellular	6.29	12.77
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	15.04	12.76
KRH21930	Soybean	cytosol	7.69	12.57
EES18511	Sorghum	plasma membrane	12.94	10.36

Protein Annotations

MapMan:35.1	GO:A0A078DGV6	EnsemblPlants:CDX88465	ProteinID:CDX88465	ProteinID:CDX88465.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0006644	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	GO:GO:0016746	EnsemblPlantsGene:GSBRNA2T00148011001	PFAM:PF01553	PRINTS:PR00979	PANTHER:PTHR12497
PANTHER:PTHR12497:SF5	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593	InterPro:Tafazzin	UniParc:UPI0004EDEE91

Description

BnaC06g39090D

Coordinates

chrLK031855:+:1145226..1146962

Molecular Weight (calculated)

31791.0 Da

IEP (calculated)

9.776

GRAVY (calculated)

-0.030

Length

286 amino acids

Sequence
(BLAST)

001: MGRIMEWAAR SNHLGGVPRK AVITAVGAFA RAVANLCNKT TVHSADTLMT LVRSRPPGVP LITVSNHMST LDDPVMWGGF KGLLSLDPEL ARWVLAAEDI
101: CFKNPVFSYI FRTAGKCIPI TRGGGIYQEH MSEALERLKD GSWLHTFPEG KVFQEDVPIR RLKWGTASLI ARCPVTPIVL PIIHRGFDEM MPEKYIYGRR
201: PPLPLWNKNL KVVVGEPIEF DVPMMVETAV SASSGHVTAS LQEAKWPVLS SAGRKLDETA QRYLYTALSE KIQSSLETLR LLAKRL

Best Arabidopsis Sequence Match ( AT1G78690.5 )
(BLAST)

001: MGKIMEWAAR SDHLGGIPRN TVIMAVSAFA KAVANLCNKS SVHNADTLMN LVQSRPPGVP LITVSNHMST LDDPVMWGAF KGLLSLDPEL ARWVLAAEDI
101: CFRNPIFSYI FRTGKCIPIT RGGGIYQENM NEALQRLKDG SWLHTFPEGK VFQDDVPIRR LKWGTASLIA RSPVTPIVLP IIHRGFEEMM PENYNNGRRP
201: LVPLPNKHLK VVVGEPIEFD VPMMVETAVL DSRHVTPPLQ EVKWPVLTSA GQVLDETAQR HLYIALSEKI QSSLETLRLL AKRL

Arabidopsis Description

N-acylphosphatidylethanolamine synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.