Factsheet for TraesCS1A01G338300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	97.02	97.31
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	93.45	93.18
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	92.26	89.6
Os05t0517500-01	Rice	plasma membrane	83.63	83.38
OQU78307	Sorghum	cytosol	42.86	81.36
EES19816	Sorghum	endoplasmic reticulum, extracellular	79.17	77.78
Zm00001d010744_P001	Maize	extracellular	78.57	77.19
Zm00001d028402_P001	Maize	mitochondrion	12.2	67.21
EES18511	Sorghum	plasma membrane	61.61	57.98
GSMUA_Achr6P31760_001	Banana	plasma membrane	61.61	57.5
PGSC0003DMT400054757	Potato	cytosol	55.36	57.06
KRH21931	Soybean	extracellular	57.44	56.43
PGSC0003DMT400018204	Potato	vacuole	56.85	56.18
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	55.65	55.82
Solyc07g062270.2.1	Tomato	vacuole	55.95	55.29
Solyc10g007410.2.1	Tomato	plasma membrane	56.55	55.23
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	54.76	54.6
CDX87443	Canola	extracellular	46.43	53.06
AT1G78660.1	Thale cress	peroxisome	54.76	52.87
CDY14595	Canola	plasma membrane	53.57	52.33
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.57	52.33
VIT_19s0014g00980.t01	Wine grape	plastid	59.52	52.08
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	53.27	52.03
Bra008376.1-P	Field mustard	plasma membrane	53.27	52.03
CDY26875	Canola	plasma membrane	53.27	52.03
CDX88464	Canola	extracellular, plasma membrane, vacuole	53.27	52.03
AT1G78680.1	Thale cress	extracellular	53.27	51.59
KRH21930	Soybean	cytosol	26.49	50.86
Bra035056.1-P	Field mustard	extracellular	51.49	50.44
CDX88462	Canola	cytosol	11.31	48.72
AT1G78670.1	Thale cress	extracellular	50.89	48.58
KRH21929	Soybean	extracellular	18.75	44.68
CDX88465	Canola	mitochondrion	14.88	17.48

Protein Annotations

EnsemblPlants:TraesCS1A01G338300.1	EnsemblPlantsGene:TraesCS1A01G338300	Gene3D:3.40.50.880	GO:GO:0003674	GO:GO:0003824	GO:GO:0008242
GO:GO:0016787	InterPro:Class_I_gatase-like	InterPro:IPR015527	InterPro:IPR029062	InterPro:Pept_C26_g-glut_hydrolase	InterPro:Peptidase_C26
KEGG:00790+3.4.19.9	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0	PFAM:PF07722	PFscan:PS51275	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52317	MapMan:50.3.4	:	:	:

Description

No Description!

Coordinates

chr1A:-:527959241..527963105

Molecular Weight (calculated)

36896.2 Da

IEP (calculated)

8.286

GRAVY (calculated)

-0.079

Length

336 amino acids

Sequence
(BLAST)

001: MASPPRHLPP LLLLLALLGT SSAAAPGVIR LPRAGACAAP ADPAVYDRPV IGIVTHPGDG AAGRIDNGTS TSYIGASYVK FVEAGGARVI PLIYNEPDER
101: LLEKLSLVNG VLFTGGSVKR GPYFETIKKV FQYVLDKNDA GVPFPLFAQC LGFELVSMIV SKDNNILESF HASDQASTLQ FPNYSSLQGS VFGRFHPDLI
201: KKLSTSCLVM QNHKYGISPK RLRENDALSS FFKILTISPD ENGEVYVSTV EAQKYPITCT QWHPEKAIFE WRKPMIPHSE DAVQVTQNFA NYFISQARKS
301: PNSPPADKVL DNLIYNYIPT FSGKTSKSFE LVYLFS

Best Arabidopsis Sequence Match ( AT1G78660.2 )
(BLAST)

001: MWRYICLPFF LLLWNDIGLA KEASESILLP SESGFDGSRS PVCSSPDPNL NYRPVIGILS HPGDGASGRL TNDTSSTYIA ASYVKFAEAG GARVIPLIYN
101: EPEEVLFQKL ELVNGVIFTG GWAKKYDYFE IVKKIFTKAL ERNDAGEHFP VYGICLGFEL MSIIISQNRD ILERFDAEDN ASSLQFVDNV NNDGTLFQRF
201: PPELLKKLST DCLVMQKHKY GITPANFQAN PALSSFFEIL TTCIDENSKT YVSTVKAKRY PITGFQWHPE KNAFEWGSSA IPHSEDAIQV TQHAASYLVS
301: EARKSLNRPE SQKVLSNLIY NYKPTYCGYA GRGYDEVYIF TQPRSRF

Arabidopsis Description

GGH1Gamma-glutamyl hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.