CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26875	Canola	plasma membrane	98.26	98.26
AT1G78660.1	Thale cress	peroxisome	81.98	81.03
CDX88462	Canola	cytosol	16.28	71.79
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	70.35	70.35
CDX88464	Canola	extracellular, plasma membrane, vacuole	69.19	69.19
CDX87443	Canola	extracellular	56.98	66.67
KRH21931	Soybean	extracellular	63.95	64.33
PGSC0003DMT400018204	Potato	vacuole	60.76	61.47
Solyc07g062270.2.1	Tomato	vacuole	60.17	60.88
PGSC0003DMT400054757	Potato	cytosol	54.65	57.67
OQU78307	Sorghum	cytosol	29.65	57.63
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	55.81	57.31
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	56.1	57.27
GSMUA_Achr6P31760_001	Banana	plasma membrane	58.72	56.11
Zm00001d010744_P001	Maize	extracellular	55.52	55.85
Solyc10g007410.2.1	Tomato	plasma membrane	55.81	55.81
EES19816	Sorghum	endoplasmic reticulum, extracellular	54.94	55.26
VIT_19s0014g00980.t01	Wine grape	plastid	61.05	54.69
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.49	54.6
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.62	54.03
TraesCS1A01G338300.1	Wheat	golgi	52.33	53.57
Os05t0517500-01	Rice	plasma membrane	52.33	53.41
KRH21930	Soybean	cytosol	27.03	53.14
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	52.91	52.6
Zm00001d028402_P001	Maize	mitochondrion	8.72	49.18
KRH21929	Soybean	extracellular	19.77	48.23
EES18511	Sorghum	plasma membrane	41.86	40.34
CDX88465	Canola	mitochondrion	13.08	15.73

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	GO:A0A078FJK7	UniProt:A0A078FJK7	EnsemblPlants:CDY14595
ProteinID:CDY14595	ProteinID:CDY14595.1	InterPro:Class_I_gatase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008242	GO:GO:0016787	GO:GO:0019538	GO:GO:0034722
EnsemblPlantsGene:GSBRNA2T00084314001	InterPro:IPR015527	InterPro:IPR029062	PFAM:PF07722	PFscan:PS51275	PANTHER:PTHR11315
PANTHER:PTHR11315:SF0	MetaCyc:PWY-2161B	MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112	InterPro:Pept_C26_g-glut_hydrolase
InterPro:Peptidase_C26	SUPFAM:SSF52317	SignalP:SignalP-noTM	UniParc:UPI0004EDE7E5	:	:

Description

BnaC02g25180DBnaC02g25180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJK7]

Coordinates

chrLK032045:-:85142..87576

Molecular Weight (calculated)

38551.0 Da

IEP (calculated)

8.038

GRAVY (calculated)

-0.223

Length

344 amino acids

Sequence
(BLAST)

001: MWKLCFCLPF LLLDIGVAKA PASIYLPSQT GADGSSNPVC SSPDPNLNHR PVIGILSHPG DGASGRLSND TTSTYIAASY VKFAEAGGAR VIPLIYNEPE
101: DVLFKKLELV NGVIFTGGWA KKYEYFDMVT KIFKKTLERN DAGEHFPIYG ICLGFELMSI IVSQDRGILQ RFDAEDNASS LQFVENVNIE GTLFQRFPPE
201: LLRKLSTDCL VMQKHRWGIT PEKFKANHAL SSFFEIVTTC IDENSKTYVS TVKAKKYPIT GFQWHPEKNA FEWGSSQIPH SADAIQVTQY AASYLVSEAR
301: KSLNRPSSEK VLKNLIYNYK PTYCGYAGKG YDEVYLFTQP RSRL

Best Arabidopsis Sequence Match ( AT1G78660.2 )
(BLAST)

001: MWRYICLPFF LLLWNDIGLA KEASESILLP SESGFDGSRS PVCSSPDPNL NYRPVIGILS HPGDGASGRL TNDTSSTYIA ASYVKFAEAG GARVIPLIYN
101: EPEEVLFQKL ELVNGVIFTG GWAKKYDYFE IVKKIFTKAL ERNDAGEHFP VYGICLGFEL MSIIISQNRD ILERFDAEDN ASSLQFVDNV NNDGTLFQRF
201: PPELLKKLST DCLVMQKHKY GITPANFQAN PALSSFFEIL TTCIDENSKT YVSTVKAKRY PITGFQWHPE KNAFEWGSSA IPHSEDAIQV TQHAASYLVS
301: EARKSLNRPE SQKVLSNLIY NYKPTYCGYA GRGYDEVYIF TQPRSRF

Arabidopsis Description

GGH1Gamma-glutamyl hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.