Factsheet for TraesCS1D01G340500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G338300.1	Wheat	golgi	97.31	97.02
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	93.43	92.88
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	92.54	89.6
Os05t0517500-01	Rice	plasma membrane	84.18	83.68
OQU78307	Sorghum	cytosol	43.28	81.92
Zm00001d010744_P001	Maize	extracellular	79.7	78.07
EES19816	Sorghum	endoplasmic reticulum, extracellular	79.4	77.78
Zm00001d028402_P001	Maize	mitochondrion	12.54	68.85
EES18511	Sorghum	plasma membrane	63.28	59.38
GSMUA_Achr6P31760_001	Banana	plasma membrane	62.39	58.06
KRH21931	Soybean	extracellular	58.21	57.02
PGSC0003DMT400054757	Potato	cytosol	54.93	56.44
PGSC0003DMT400018204	Potato	vacuole	56.72	55.88
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	55.82	55.82
Solyc07g062270.2.1	Tomato	vacuole	55.82	55.0
Solyc10g007410.2.1	Tomato	plasma membrane	56.12	54.65
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	54.93	54.6
CDX87443	Canola	extracellular	47.16	53.74
AT1G78660.1	Thale cress	peroxisome	55.52	53.45
CDY14595	Canola	plasma membrane	54.03	52.62
Bra008376.1-P	Field mustard	plasma membrane	53.73	52.33
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.73	52.33
CDY26875	Canola	plasma membrane	53.73	52.33
AT1G78680.1	Thale cress	extracellular	54.03	52.16
VIT_19s0014g00980.t01	Wine grape	plastid	59.7	52.08
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	53.43	52.03
CDX88464	Canola	extracellular, plasma membrane, vacuole	53.43	52.03
KRH21930	Soybean	cytosol	26.57	50.86
Bra035056.1-P	Field mustard	extracellular	51.94	50.73
CDX88462	Canola	cytosol	11.64	50.0
AT1G78670.1	Thale cress	extracellular	51.64	49.15
KRH21929	Soybean	extracellular	18.81	44.68
CDX88465	Canola	mitochondrion	14.93	17.48

Protein Annotations

EnsemblPlants:TraesCS1D01G340500.1	EnsemblPlantsGene:TraesCS1D01G340500	Gene3D:3.40.50.880	GO:GO:0003674	GO:GO:0003824	GO:GO:0008242
GO:GO:0016787	InterPro:Class_I_gatase-like	InterPro:IPR015527	InterPro:IPR029062	InterPro:Pept_C26_g-glut_hydrolase	InterPro:Peptidase_C26
KEGG:00790+3.4.19.9	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0	PFAM:PF07722	PFscan:PS51275	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52317	MapMan:50.3.4	:	:	:

Description

No Description!

Coordinates

chr1D:-:430416591..430420737

Molecular Weight (calculated)

36982.4 Da

IEP (calculated)

8.286

GRAVY (calculated)

-0.082

Length

335 amino acids

Sequence
(BLAST)

001: MASPRHLLPL LLLLALLAPS SSAAPGVIRL PRAGACAAPA DPAVYDRPVI GIVTHPGDGA AGRIDNGTST SYIGASYVKF VEAGGARVIP LIYNEPDERL
101: LEKLSLVNGV LFTGGSVKRG PYFETIKKVF QYVLDKNDAG VPFPLFAQCL GFELVSMIVS KDNNILESFH ASDQASTLQF PNYSSLQGSV FERFHPDLIK
201: KLSTSCLVMQ NHKYGISPKR LRENDALSSF FKILTISPDE NGEVYVSTVE AQKYPITCTQ WHPEKAIFEW RKPMIPHSED AVQVTQNFAN YFISQARKSP
301: NRPPADKVLD NLIYNYIPTF SGKTSKSFEL VYLFS

Best Arabidopsis Sequence Match ( AT1G78660.3 )
(BLAST)

001: MIDNNCLYKE ELNRNSYSGL AKEASESILL PSESGFDGSR SPVCSSPDPN LNYRPVIGIL SHPGDGASGR LTNDTSSTYI AASYVKFAEA GGARVIPLIY
101: NEPEEVLFQK LELVNGVIFT GGWAKKYDYF EIVKKIFTKA LERNDAGEHF PVYGICLGFE LMSIIISQNR DILERFDAED NASSLQFVDN VNNDGTLFQR
201: FPPELLKKLS TDCLVMQKHK YGITPANFQA NPALSSFFEI LTTCIDENSK TYVSTVKAKR YPITGFQWHP EKNAFEWGSS AIPHSEDAIQ VTQHAASYLV
301: SEARKSLNRP ESQKVLSNLI YNYKPTYCGY AGRGYDEVYI FTQPRSRF

Arabidopsis Description

GGH1Gamma-glutamyl hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL6]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.