Factsheet for Bra008376.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 7
endoplasmic reticulum 5
vacuole 6
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26875	Canola	plasma membrane	100.0	100.0
AT1G78660.1	Thale cress	peroxisome	83.14	82.18
Bra035058.1-P	Field mustard	extracellular, golgi, vacuole	71.22	71.22
Bra035056.1-P	Field mustard	extracellular	64.24	64.43
KRH21931	Soybean	extracellular	63.66	64.04
PGSC0003DMT400018204	Potato	vacuole	60.76	61.47
Solyc07g062270.2.1	Tomato	vacuole	60.17	60.88
PGSC0003DMT400054757	Potato	cytosol	54.94	57.98
OQU78307	Sorghum	cytosol	29.65	57.63
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	56.4	57.57
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	55.52	57.01
Solyc10g007410.2.1	Tomato	plasma membrane	56.1	56.1
GSMUA_Achr6P31760_001	Banana	plasma membrane	58.43	55.83
Zm00001d010744_P001	Maize	extracellular	54.94	55.26
VIT_19s0014g00980.t01	Wine grape	plastid	61.63	55.21
EES19816	Sorghum	endoplasmic reticulum, extracellular	54.65	54.97
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.2	54.3
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.33	53.73
TraesCS1A01G338300.1	Wheat	golgi	52.03	53.27
KRH21930	Soybean	cytosol	27.03	53.14
Os05t0517500-01	Rice	plasma membrane	52.03	53.12
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	52.62	52.31
Zm00001d028402_P001	Maize	mitochondrion	8.72	49.18
KRH21929	Soybean	extracellular	19.48	47.52
EES18511	Sorghum	plasma membrane	41.57	40.06

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	EnsemblPlantsGene:Bra008376	EnsemblPlants:Bra008376.1	EnsemblPlants:Bra008376.1-P
InterPro:Class_I_gatase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008242
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0034722	GO:GO:0046900	InterPro:IPR015527
InterPro:IPR029062	UniProt:M4CVX9	PFAM:PF07722	PFscan:PS51275	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0
InterPro:Pept_C26_g-glut_hydrolase	InterPro:Peptidase_C26	SUPFAM:SSF52317	SignalP:SignalP-noTM	UniParc:UPI00025466B4	:

Description

AT1G78660 (E=3e-173) ATGGH1 | gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative

Coordinates

chrA02:+:15173949..15175956

Molecular Weight (calculated)

38538.1 Da

IEP (calculated)

8.242

GRAVY (calculated)

-0.201

Length

344 amino acids

Sequence
(BLAST)

001: MWKLCFCLPF LLLDIGVAKA SASIYLPSQT GADGSSSPVC SSPDPKLNYR PVIGILSHPG DGASGRLTND TTSTYIAASY VKFAEAGGAR VIPLIYNEPE
101: DVLFKKLELV NGVIFTGGWA KKYEYFDMVT KIFKKALERN DAGEHFPIYG ICLGFELMSI IVSQDRGILQ RFDAEDNASS LQFVENVNIE GTLFQRFPPE
201: LLRKLSTDCL VMQKHRWGIT PEKFKANHAL SSFFEIVTTC IDENSKTYVS TVKAKKYPIT GFQWHPEKNA FEWGSSQIPH SADAIQVTQY AASYLVSEAR
301: KSLNRPSSEK VLKNLIYNYK PTYCGYAGKG YDEVYLFTQP RSRL

Best Arabidopsis Sequence Match ( AT1G78660.2 )
(BLAST)

001: MWRYICLPFF LLLWNDIGLA KEASESILLP SESGFDGSRS PVCSSPDPNL NYRPVIGILS HPGDGASGRL TNDTSSTYIA ASYVKFAEAG GARVIPLIYN
101: EPEEVLFQKL ELVNGVIFTG GWAKKYDYFE IVKKIFTKAL ERNDAGEHFP VYGICLGFEL MSIIISQNRD ILERFDAEDN ASSLQFVDNV NNDGTLFQRF
201: PPELLKKLST DCLVMQKHKY GITPANFQAN PALSSFFEIL TTCIDENSKT YVSTVKAKRY PITGFQWHPE KNAFEWGSSA IPHSEDAIQV TQHAASYLVS
301: EARKSLNRPE SQKVLSNLIY NYKPTYCGYA GRGYDEVYIF TQPRSRF

Arabidopsis Description

GGH1Gamma-glutamyl hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.