Factsheet for Bra035058.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	97.67	97.67
AT1G78680.1	Thale cress	extracellular	80.52	79.83
Bra008376.1-P	Field mustard	plasma membrane	71.22	71.22
Bra035056.1-P	Field mustard	extracellular	65.99	66.18
KRH21931	Soybean	extracellular	62.79	63.16
PGSC0003DMT400018204	Potato	vacuole	61.34	62.06
Solyc07g062270.2.1	Tomato	vacuole	59.59	60.29
PGSC0003DMT400054757	Potato	cytosol	56.69	59.82
Solyc10g007410.2.1	Tomato	plasma membrane	57.85	57.85
GSMUA_Achr6P31760_001	Banana	plasma membrane	60.17	57.5
OQU78307	Sorghum	cytosol	29.36	57.06
VIT_19s0014g00980.t01	Wine grape	plastid	63.66	57.03
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	55.23	56.72
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	54.94	56.08
Os05t0517500-01	Rice	plasma membrane	53.49	54.6
EES19816	Sorghum	endoplasmic reticulum, extracellular	53.49	53.8
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.62	53.71
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.03	53.43
TraesCS1A01G338300.1	Wheat	golgi	52.03	53.27
Zm00001d010744_P001	Maize	extracellular	52.62	52.92
KRH21930	Soybean	cytosol	26.45	52.0
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	51.74	51.45
KRH21929	Soybean	extracellular	20.64	50.35
Zm00001d028402_P001	Maize	mitochondrion	8.14	45.9
EES18511	Sorghum	plasma membrane	41.57	40.06

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	EnsemblPlantsGene:Bra035058	EnsemblPlants:Bra035058.1	EnsemblPlants:Bra035058.1-P
InterPro:Class_I_gatase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008242
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0034722	GO:GO:0046900	InterPro:IPR015527
InterPro:IPR029062	UniProt:M4F1W1	PFAM:PF07722	PFscan:PS51275	PANTHER:PTHR11315	PANTHER:PTHR11315:SF0
InterPro:Pept_C26_g-glut_hydrolase	InterPro:Peptidase_C26	SUPFAM:SSF52317	SignalP:SignalP-noTM	UniParc:UPI0002541C5D	SEG:seg

Description

AT1G78680 (E=2e-155) ATGGH2 | ATGGH2 (gamma-glutamyl hydrolase 2); omega peptidase

Coordinates

chrA07:+:21980436..21982593

Molecular Weight (calculated)

38559.2 Da

IEP (calculated)

8.179

GRAVY (calculated)

-0.117

Length

344 amino acids

Sequence
(BLAST)

001: MWRYVWSLFL LFVVWKDTIV MAKSAAILLP SQTGVDDFVC SAPDPSLNYK PVIGILSHPG DGATGRLNND TNASYIAASY VKLAEAGGAR VIPLIYNEPE
101: ELLFKKLELV NGVIFTGGWA KKGLYFDVVK KIFTRALERN DGGEHFPVYA ICLGFELLTM IISQNTDIFE KVDAKNAASS LQFVGNVSTQ GTVFQRFPPE
201: LLKKLTTDCL VMQNHQFGIS PDNFEGNIAL SRFFKIVTTC LDGNRKAYVS TVQSKKYPVT GFQWHPEKNA FEWGSSKIPH SEDAVHVTQL TANYLVSEAR
301: KSQNRPSPEK VLSNLIYNFK PTYCGYEGRG YDEVYIFTQQ RSLL

Best Arabidopsis Sequence Match ( AT1G78680.1 )
(BLAST)

001: MWSYVWLPLV ALSLFKDSII MAKAATILLP SQTGFDISRS PVCSAPDPNL NYRPVIGILS HPGDGASGRL SNATDASSIA ASYVKLAESG GARVIPLIFN
101: EPEEILFQKL ELVNGVILTG GWAKEGLYFE IVKKIFNKVL ERNDAGEHFP IYAICLGFEL LTMIISQNRD IFEKMDARNS ASSLQFVENV NIQGTIFQRF
201: PPELLKKLGT DCLVMQNHRF GISPQSFEGN IALSNFFKIV TTCVDDNGKV YVSTVQSTKY PVTGFQWHPE KNAFEWGSSK IPHSEDAIQV TQHAANHLVS
301: EARKSLNRPE SKKVLSNLIY NYKPTYCGYA GIGYDEVYIF TQQRSLL

Arabidopsis Description

GGH2Gamma-glutamyl hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65355]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.