CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87442	Canola	endoplasmic reticulum, extracellular, plasma membrane	96.22	96.22
AT1G78680.1	Thale cress	extracellular	80.23	79.54
CDY26875	Canola	plasma membrane	70.06	70.06
CDY14595	Canola	plasma membrane	69.19	69.19
CDX87443	Canola	extracellular	58.14	68.03
CDX88462	Canola	cytosol	15.41	67.95
KRH21931	Soybean	extracellular	62.79	63.16
PGSC0003DMT400018204	Potato	vacuole	60.76	61.47
Solyc07g062270.2.1	Tomato	vacuole	59.3	60.0
PGSC0003DMT400054757	Potato	cytosol	56.1	59.2
GSMUA_Achr6P31760_001	Banana	plasma membrane	60.76	58.06
VIT_19s0014g00980.t01	Wine grape	plastid	63.95	57.29
OQU78307	Sorghum	cytosol	29.36	57.06
Solyc10g007410.2.1	Tomato	plasma membrane	56.98	56.98
PGSC0003DMT400086403	Potato	endoplasmic reticulum, plasma membrane	55.23	56.72
Solyc07g062280.2.1	Tomato	extracellular, plasma membrane	55.52	56.68
Os05t0517500-01	Rice	plasma membrane	53.49	54.6
EES19816	Sorghum	endoplasmic reticulum, extracellular	53.49	53.8
TraesCS1B01G350700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.62	53.71
TraesCS1D01G340500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.03	53.43
TraesCS1A01G338300.1	Wheat	golgi	52.03	53.27
Zm00001d010744_P001	Maize	extracellular	52.03	52.34
HORVU1Hr1G076470.14	Barley	endoplasmic reticulum, plasma membrane	52.33	52.02
KRH21930	Soybean	cytosol	25.87	50.86
KRH21929	Soybean	extracellular	20.64	50.35
Zm00001d028402_P001	Maize	mitochondrion	8.14	45.9
EES18511	Sorghum	plasma membrane	41.86	40.34
CDX88465	Canola	mitochondrion	13.37	16.08

Protein Annotations

KEGG:00790+3.4.19.9	Gene3D:3.40.50.880	MapMan:50.3.4	GO:A0A078DIV1	EnsemblPlants:CDX88464	ProteinID:CDX88464
ProteinID:CDX88464.1	InterPro:Class_I_gatase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0008242	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00148010001	InterPro:IPR015527	InterPro:IPR029062	PFAM:PF07722	PFscan:PS51275	PANTHER:PTHR11315
PANTHER:PTHR11315:SF0	MetaCyc:PWY-2161B	MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112	InterPro:Pept_C26_g-glut_hydrolase
InterPro:Peptidase_C26	SUPFAM:SSF52317	SignalP:SignalP-noTM	UniParc:UPI0004EEADAB	:	:

Description

BnaC06g39080D

Coordinates

chrLK031855:+:1142722..1145137

Molecular Weight (calculated)

38454.1 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.068

Length

344 amino acids

Sequence
(BLAST)

001: MWRYVWSLLL LFVVCKDTIF MAKSAAILLP SQTGVDDSVC SAPDPSLNYK PVIGILTHPG DGATGRLNND TNASYIAASY VKLAEAGGAR VVPLIYNEPE
101: ELLFQKLELV NGVIFTGGWA KKGLYFDVVK KIFTRALERN DGGEHFPVYA ICLGFELLTM IISQNTDIFE KVDAKNAASS LQFVEIVSIQ GTVFQRFPPE
201: LLKKLTTDCL VMQNHQFGIS PDNFEGNIAL SRFFKIVTTC LDGNRKAYVS TVQSKTYPVT GFQWHPEKNA FEWGSSKIPH SEDAVHVTQL IANYLVGEAR
301: KSQNRPSPEK VLSNLIYNYK PTYCGYEGRG YDEVYIFAQQ RSLL

Best Arabidopsis Sequence Match ( AT1G78680.1 )
(BLAST)

001: MWSYVWLPLV ALSLFKDSII MAKAATILLP SQTGFDISRS PVCSAPDPNL NYRPVIGILS HPGDGASGRL SNATDASSIA ASYVKLAESG GARVIPLIFN
101: EPEEILFQKL ELVNGVILTG GWAKEGLYFE IVKKIFNKVL ERNDAGEHFP IYAICLGFEL LTMIISQNRD IFEKMDARNS ASSLQFVENV NIQGTIFQRF
201: PPELLKKLGT DCLVMQNHRF GISPQSFEGN IALSNFFKIV TTCVDDNGKV YVSTVQSTKY PVTGFQWHPE KNAFEWGSSK IPHSEDAIQV TQHAANHLVS
301: EARKSLNRPE SKKVLSNLIY NYKPTYCGYA GIGYDEVYIF TQQRSLL

Arabidopsis Description

GGH2Gamma-glutamyl hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65355]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.