Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0105800-01 | Rice | cytosol | 39.81 | 97.73 |
| GSMUA_Achr8P29370_001 | Banana | plastid | 62.96 | 64.76 |
| PGSC0003DMT400024006 | Potato | plastid | 63.89 | 62.73 |
| AT1G22630.1 | Thale cress | cytosol | 62.96 | 61.82 |
| CDY41474 | Canola | plastid | 61.11 | 55.0 |
| EES17536 | Sorghum | plastid | 59.26 | 52.03 |
| Zm00001d011093_P001 | Maize | plastid | 56.48 | 51.26 |
| TraesCS1A01G015100.1 | Wheat | plastid | 51.85 | 50.91 |
| CDX91686 | Canola | plastid | 62.04 | 50.38 |
| TraesCS1B01G019300.1 | Wheat | plastid | 50.93 | 50.0 |
Protein Annotations
| EntrezGene:100305840 | MapMan:35.2 | EMBL:ACUP02004977 | EnsemblPlantsGene:GLYMA_08G239000 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | UniProt:I1KW91 |
| EnsemblPlants:KRH44917 | ProteinID:KRH44917 | ProteinID:KRH44917.1 | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF18 | SUPFAM:SSF57938 |
| UniParc:UPI00023C5F85 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:20402139..20403067
Molecular Weight (calculated)
11550.1 Da
IEP (calculated)
9.376
GRAVY (calculated)
-0.495
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHICVCCKG LTPLPPPPPP LHQRRNTLVI TFASKSGGGF SLNSLLKSCK SCGGKGAIEC PGCKGTGKNK KNGNIFERWK CFDCQGFGLK SCPSCGKEGL
101: TPEQRGER
101: TPEQRGER
001: MLKFPLCCSE LSLEPKILAF ESQLVSGRRD TIKVSAGKIG NFSLGSIFKS CETCGAKGAI ECPGCKGTGK NKKNGNMFER WKCFDCQGFG MKSCPKCGKG
101: GLTPEQRGER
101: GLTPEQRGER
Arabidopsis Description
At1g22630/F12K8_2 [Source:UniProtKB/TrEMBL;Acc:Q9SKA5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.