Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- golgi 2
- extracellular 2
- cytosol 2
- mitochondrion 1
- vacuole 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0105800-01 | Rice | cytosol | 35.45 | 88.64 |
| CDY41474 | Canola | plastid | 81.82 | 75.0 |
| CDX91686 | Canola | plastid | 82.73 | 68.42 |
| KRH44917 | Soybean | plastid | 61.82 | 62.96 |
| GSMUA_Achr8P29370_001 | Banana | plastid | 57.27 | 60.0 |
| PGSC0003DMT400024006 | Potato | plastid | 60.0 | 60.0 |
| Zm00001d011093_P001 | Maize | plastid | 52.73 | 48.74 |
| TraesCS1A01G015100.1 | Wheat | plastid | 48.18 | 48.18 |
| TraesCS1B01G019300.1 | Wheat | plastid | 47.27 | 47.27 |
| EES17536 | Sorghum | plastid | 51.82 | 46.34 |
Protein Annotations
| MapMan:35.2 | EntrezGene:838869 | UniProt:A0A178W515 | ProteinID:AAF18516.1 | ProteinID:AEE30262.1 | ArrayExpress:AT1G22630 |
| EnsemblPlantsGene:AT1G22630 | RefSeq:AT1G22630 | TAIR:AT1G22630 | RefSeq:AT1G22630-TAIR-G | EnsemblPlants:AT1G22630.1 | TAIR:AT1G22630.1 |
| EMBL:AY045605 | EMBL:AY090329 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009536 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | RefSeq:NP_564175.2 | ProteinID:OAP13567.1 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF18 |
| UniProt:Q9SKA5 | SUPFAM:SSF57938 | UniParc:UPI00000A10F0 | SEG:seg | : | : |
Description
At1g22630/F12K8_2 [Source:UniProtKB/TrEMBL;Acc:Q9SKA5]
Coordinates
chr1:+:8003223..8004304
Molecular Weight (calculated)
11879.6 Da
IEP (calculated)
9.094
GRAVY (calculated)
-0.392
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKFPLCCSE LSLEPKILAF ESQLVSGRRD TIKVSAGKIG NFSLGSIFKS CETCGAKGAI ECPGCKGTGK NKKNGNMFER WKCFDCQGFG MKSCPKCGKG
101: GLTPEQRGER
101: GLTPEQRGER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.