CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07517

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22630.1	EES07517	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0105800-01	Rice	cytosol	32.52	90.91
Zm00001d011093_P001	Maize	plastid	69.11	71.43
KRH44917	Soybean	plastid	52.03	59.26
TraesCS1A01G015100.1	Wheat	plastid	51.22	57.27
GSMUA_Achr8P29370_001	Banana	plastid	48.78	57.14
PGSC0003DMT400024006	Potato	plastid	50.41	56.36
TraesCS1B01G019300.1	Wheat	plastid	49.59	55.45
AT1G22630.1	Thale cress	cytosol	46.34	51.82
CDY41474	Canola	plastid	48.78	50.0
CDX91686	Canola	plastid	48.78	45.11

Protein Annotations

MapMan:35.2	EntrezGene:8066600	UniProt:C5YY12	EnsemblPlants:EES17536	ProteinID:EES17536	ProteinID:EES17536.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0031072	GO:GO:0051082	InterPro:HSP_DnaJ_Cys-rich_dom_sf
PANTHER:PTHR15852	PANTHER:PTHR15852:SF18	EnsemblPlantsGene:SORBI_3009G004500	SUPFAM:SSF57938	UniParc:UPI0001A88C29	RefSeq:XP_002439106.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:388858..390973

Molecular Weight (calculated)

12644.1 Da

IEP (calculated)

10.683

GRAVY (calculated)

-0.450

Length

123 amino acids

Sequence
(BLAST)

001: MELAMATGSS SSSLVTGLRW RTGSAAFSSA GDRRRSWTTT ASGRGGGPRR LTVSAAAAAA AAACKTCKGK GAVECPGCKG TGKNKKNGNI FERWKCFDCQ
101: GFGLMSCPTC GKGGLTPEQR GER

Best Arabidopsis Sequence Match ( AT1G22630.1 )
(BLAST)

001: MLKFPLCCSE LSLEPKILAF ESQLVSGRRD TIKVSAGKIG NFSLGSIFKS CETCGAKGAI ECPGCKGTGK NKKNGNMFER WKCFDCQGFG MKSCPKCGKG
101: GLTPEQRGER

Arabidopsis Description

At1g22630/F12K8_2 [Source:UniProtKB/TrEMBL;Acc:Q9SKA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.