Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG95394 | Soybean | nucleus | 90.0 | 90.48 |
Bra024127.1-P | Field mustard | nucleus | 21.05 | 29.34 |
CDY30196 | Canola | cytosol | 21.05 | 29.34 |
Bra040595.1-P | Field mustard | cytosol | 20.18 | 26.81 |
CDY60784 | Canola | cytosol | 15.79 | 26.79 |
CDY22036 | Canola | cytosol | 27.89 | 26.68 |
CDY41709 | Canola | peroxisome | 24.56 | 26.62 |
AT3G27510.1 | Thale cress | cytosol | 20.18 | 26.14 |
AT5G40320.1 | Thale cress | nucleus | 26.84 | 25.76 |
Bra025591.1-P | Field mustard | nucleus | 26.67 | 25.72 |
CDY46706 | Canola | mitochondrion | 23.86 | 25.52 |
CDY27938 | Canola | cytosol | 19.65 | 25.51 |
CDY58516 | Canola | nucleus | 22.46 | 25.5 |
CDY36839 | Canola | cytosol | 27.02 | 25.45 |
CDY36353 | Canola | plastid | 13.86 | 25.32 |
Bra025569.1-P | Field mustard | nucleus | 23.51 | 25.14 |
CDY27940 | Canola | cytosol | 24.74 | 25.0 |
CDY52787 | Canola | nucleus | 27.54 | 24.88 |
AT3G06990.1 | Thale cress | nucleus | 23.51 | 24.86 |
AT5G45730.1 | Thale cress | nucleus | 24.39 | 24.82 |
CDY44574 | Canola | cytosol | 20.88 | 24.69 |
AT4G01740.1 | Thale cress | cytosol | 28.07 | 24.54 |
Bra017007.1-P | Field mustard | nucleus | 24.91 | 24.36 |
CDY69979 | Canola | nucleus | 27.19 | 24.33 |
AT3G48400.1 | Thale cress | cytosol | 26.32 | 24.23 |
CDY63456 | Canola | cytosol | 16.67 | 24.05 |
AT2G04500.1 | Thale cress | cytosol | 20.88 | 24.04 |
Bra028463.1-P | Field mustard | cytosol | 22.46 | 23.88 |
CDY52927 | Canola | cytosol | 15.79 | 23.87 |
AT4G11550.1 | Thale cress | cytosol | 27.89 | 23.8 |
AT4G16015.1 | Thale cress | cytosol | 22.28 | 23.74 |
CDY21921 | Canola | plastid | 15.79 | 23.68 |
AT4G02190.1 | Thale cress | cytosol | 27.37 | 23.67 |
AT2G19660.2 | Thale cress | nucleus | 28.6 | 23.62 |
AT3G07000.1 | Thale cress | cytosol | 23.68 | 23.52 |
AT4G14980.1 | Thale cress | cytosol | 22.46 | 23.49 |
AT5G54030.1 | Thale cress | cytosol | 17.19 | 23.39 |
AT4G01910.1 | Thale cress | cytosol | 26.67 | 23.35 |
AT5G22355.1 | Thale cress | cytosol | 27.19 | 23.34 |
AT4G01920.1 | Thale cress | cytosol | 26.84 | 23.25 |
AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 24.04 | 23.18 |
CDX71062 | Canola | cytosol | 25.44 | 23.16 |
AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 21.93 | 23.11 |
CDX88733 | Canola | cytosol | 25.26 | 23.08 |
CDX67463 | Canola | cytosol | 18.77 | 23.06 |
AT4G01930.1 | Thale cress | cytosol | 26.32 | 23.01 |
AT5G29624.1 | Thale cress | cytosol | 19.65 | 22.95 |
CDY63290 | Canola | cytosol | 20.18 | 22.91 |
AT4G01350.1 | Thale cress | cytosol | 26.14 | 22.85 |
AT5G37620.1 | Thale cress | cytosol | 26.14 | 22.85 |
AT3G46810.1 | Thale cress | cytosol | 27.37 | 22.74 |
AT2G43220.1 | Thale cress | peroxisome | 21.4 | 22.68 |
AT5G54050.1 | Thale cress | nucleus | 22.98 | 22.59 |
AT4G13992.1 | Thale cress | mitochondrion | 25.44 | 22.59 |
AT5G59940.1 | Thale cress | cytosol | 25.79 | 22.58 |
CDY22034 | Canola | endoplasmic reticulum | 24.91 | 22.58 |
AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 23.86 | 22.52 |
CDY30007 | Canola | cytosol, nucleus, plastid | 26.14 | 22.41 |
AT4G01760.1 | Thale cress | cytosol | 26.14 | 22.34 |
CDY28703 | Canola | cytosol | 19.47 | 22.29 |
AT4G11540.1 | Thale cress | cytosol | 20.53 | 22.29 |
CDY65338 | Canola | cytosol | 26.14 | 22.24 |
AT2G04680.1 | Thale cress | cytosol | 25.61 | 22.22 |
AT3G27473.1 | Thale cress | cytosol | 25.79 | 22.21 |
CDX97701 | Canola | cytosol | 8.25 | 22.17 |
AT4G11390.2 | Thale cress | cytosol | 21.23 | 22.16 |
AT3G28650.1 | Thale cress | cytosol | 25.79 | 22.11 |
CDY51540 | Canola | nucleus | 19.82 | 22.03 |
CDY64703 | Canola | cytosol | 25.61 | 21.99 |
AT5G54020.2 | Thale cress | nucleus | 22.63 | 21.94 |
CDX93183 | Canola | cytosol | 25.61 | 21.92 |
AT1G58037.1 | Thale cress | cytosol | 13.16 | 21.87 |
AT3G46800.1 | Thale cress | cytosol | 25.96 | 21.7 |
AT5G54040.1 | Thale cress | cytosol | 22.63 | 21.64 |
CDY22883 | Canola | cytosol | 24.74 | 21.59 |
AT3G43890.1 | Thale cress | cytosol | 24.91 | 21.48 |
AT1G65180.1 | Thale cress | nucleus | 24.56 | 21.44 |
AT5G59920.1 | Thale cress | cytosol | 26.67 | 21.41 |
AT2G19650.1 | Thale cress | cytosol | 25.44 | 21.26 |
AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 24.21 | 21.04 |
Bra011134.1-P | Field mustard | mitochondrion | 25.44 | 20.92 |
AT5G42840.1 | Thale cress | cytosol | 24.56 | 20.86 |
AT3G27490.1 | Thale cress | cytosol | 24.74 | 20.67 |
Bra033522.1-P | Field mustard | cytosol | 17.72 | 20.57 |
AT3G27500.1 | Thale cress | cytosol | 24.91 | 20.52 |
Bra020274.1-P | Field mustard | nucleus | 22.28 | 20.29 |
CDY44167 | Canola | cytosol | 17.37 | 20.12 |
AT1G69150.1 | Thale cress | cytosol | 18.25 | 20.12 |
CDY29993 | Canola | cytosol | 21.75 | 20.1 |
AT3G45530.1 | Thale cress | cytosol | 24.39 | 20.09 |
CDY09238 | Canola | cytosol | 16.67 | 20.0 |
CDY09240 | Canola | cytosol | 16.67 | 20.0 |
CDY48718 | Canola | cytosol | 12.98 | 19.95 |
CDY40661 | Canola | cytosol | 25.96 | 19.42 |
Bra040143.1-P | Field mustard | nucleus | 20.53 | 19.12 |
CDY21132 | Canola | cytosol | 20.53 | 19.12 |
CDY52789 | Canola | cytosol | 13.16 | 18.47 |
CDY42579 | Canola | nucleus | 8.77 | 18.25 |
CDY50383 | Canola | cytosol | 26.67 | 18.03 |
CDX74184 | Canola | plasma membrane | 12.63 | 17.56 |
CDY43524 | Canola | cytosol | 15.44 | 17.39 |
CDY22035 | Canola | cytosol | 26.32 | 16.93 |
CDY22052 | Canola | nucleus | 18.42 | 16.59 |
CDX74183 | Canola | cytosol | 10.0 | 16.57 |
Bra001113.1-P | Field mustard | cytosol | 13.33 | 16.49 |
CDY63460 | Canola | cytosol, mitochondrion | 11.75 | 16.11 |
AT4G01925.1 | Thale cress | cytosol | 7.54 | 15.36 |
CDY29992 | Canola | cytosol | 7.02 | 15.27 |
CDX82703 | Canola | cytosol | 25.79 | 15.23 |
CDY50382 | Canola | cytosol | 26.49 | 15.22 |
AT4G02180.1 | Thale cress | cytosol | 25.79 | 14.86 |
CDY06776 | Canola | cytosol | 7.19 | 14.39 |
Bra036288.1-P | Field mustard | cytosol, nucleus, plasma membrane | 27.19 | 9.26 |
Protein Annotations
EMBL:ACUP02002025 | EnsemblPlants:KRH67075 | EnsemblPlantsGene:GLYMA_03G145300 | EntrezGene:100784177 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0046872 | InterPro:DC1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_PHD | PFAM:PF03107 | ProteinID:KRH67075 |
ProteinID:KRH67075.1 | ScanProsite:PS01359 | SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI00023C1778 | UniProt:K7KF30 |
MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:36061853..36063902
Molecular Weight (calculated)
65345.5 Da
IEP (calculated)
6.487
GRAVY (calculated)
-0.357
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKMEHFSHI HPLLLKQEHS NNFNNQVLCS GCEELISSGP VFCCVQCNYV LHKKCAQIAR HVKHPFHPQH PLVLLSTTPY EGPYVCDSCR GLFSNFVYHC
101: YQCNYDLDVS CASQFNPDDG HKHEFLSLTN PQSFVCYACG MYANEGLACL CTVCQIWVHS GCAELPLAIR IKGHDHPLKL TYTLHHFYGF WGKLTCGFCN
201: EAMNPAFAGY FCSTCKFAVH CPQQHLGEYE DKESFSGYET EEESLDIDFT FNFFGHEHLL KFTEELESND DDVQCFDKLC DACVQPIMPP FFSCEEENCG
301: FFLHQSCAEL PRTKQHPFHK HPLTLQSKAP YDGIYKCDGC RRLGNGFVYR CDVCQFDLDV CCASLEERIE HESHKHPLFL KKTSVARQCK GCHLWSKLVF
401: VCDVCEDFAI DCGCATLLSK AWHVYDKHPL SLNYCIEGDL REHECGICNE KMSKKQWFYC CDDCDSGAHP YCVAGKFRRM KFGGSFQYDV HSHPLALVEE
501: TEQKNECGAC GEHCNGWTLE CGQCKRYFHR EGQCFWKEFK KSAKYLELSG MMRHRYAANV LASTPNATTK
101: YQCNYDLDVS CASQFNPDDG HKHEFLSLTN PQSFVCYACG MYANEGLACL CTVCQIWVHS GCAELPLAIR IKGHDHPLKL TYTLHHFYGF WGKLTCGFCN
201: EAMNPAFAGY FCSTCKFAVH CPQQHLGEYE DKESFSGYET EEESLDIDFT FNFFGHEHLL KFTEELESND DDVQCFDKLC DACVQPIMPP FFSCEEENCG
301: FFLHQSCAEL PRTKQHPFHK HPLTLQSKAP YDGIYKCDGC RRLGNGFVYR CDVCQFDLDV CCASLEERIE HESHKHPLFL KKTSVARQCK GCHLWSKLVF
401: VCDVCEDFAI DCGCATLLSK AWHVYDKHPL SLNYCIEGDL REHECGICNE KMSKKQWFYC CDDCDSGAHP YCVAGKFRRM KFGGSFQYDV HSHPLALVEE
501: TEQKNECGAC GEHCNGWTLE CGQCKRYFHR EGQCFWKEFK KSAKYLELSG MMRHRYAANV LASTPNATTK
001: MDQQSERVKQ FCNHPLRYAR IKQEGVITGR SNNCDGCGDD SGYGYYCELC NIQAHVACIG WPDIINHPCH SRHPLKKVSP ETIDYTDGKC QFCRSPLVDL
101: MYHCSICNFS VDLRCWLNPA PLTIYEQKSH SHTLTLMARK DAFTCNACGL VGDRNPYVCL ECDFMLHKGC INLPRVININ RHDHKISRTY HLGHGDWECG
201: VCRQKMDWTL GAFFCSRCPN YAVHSKCATR EDVWDGKELE DKPEDEGEED PYKVINEKEI IHFSHEEHNL KLGDDDNAAD YEKMWCDACI RPIDSDPFFK
301: CVECKFFLHK VCASLPRKKR NILHSHLLRL QYGDRHGKPF KCTSCLQYFD GFKYKCNFNS ACIHMNILFD IRCSSISEPF QHELHPHPLF RTSKEHKTCG
401: ACGEDSEYVL SCIVCDFALG MDCATLPRKV KHRCDDHVLS LHHGAGSSNG QLWCDICEGK TDASVWYYGC DECGVTLHIE CVLGDMCYLK PGNKYLGGEL
501: VPNHGMTRPI CIVCEKRCMF PFFLKGIAYS DSTVVYACSR KCAYRGHDRW EEWYSKVHCE
101: MYHCSICNFS VDLRCWLNPA PLTIYEQKSH SHTLTLMARK DAFTCNACGL VGDRNPYVCL ECDFMLHKGC INLPRVININ RHDHKISRTY HLGHGDWECG
201: VCRQKMDWTL GAFFCSRCPN YAVHSKCATR EDVWDGKELE DKPEDEGEED PYKVINEKEI IHFSHEEHNL KLGDDDNAAD YEKMWCDACI RPIDSDPFFK
301: CVECKFFLHK VCASLPRKKR NILHSHLLRL QYGDRHGKPF KCTSCLQYFD GFKYKCNFNS ACIHMNILFD IRCSSISEPF QHELHPHPLF RTSKEHKTCG
401: ACGEDSEYVL SCIVCDFALG MDCATLPRKV KHRCDDHVLS LHHGAGSSNG QLWCDICEGK TDASVWYYGC DECGVTLHIE CVLGDMCYLK PGNKYLGGEL
501: VPNHGMTRPI CIVCEKRCMF PFFLKGIAYS DSTVVYACSR KCAYRGHDRW EEWYSKVHCE
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4KEM1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.