CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27938	Canola	cytosol	56.03	71.98
CDY41709	Canola	peroxisome	39.18	42.02
CDX97701	Canola	cytosol	15.78	41.98
CDY58516	Canola	nucleus	36.17	40.64
CDY46706	Canola	mitochondrion	38.12	40.34
CDY36839	Canola	cytosol	43.09	40.17
CDY30196	Canola	cytosol	28.37	39.12
CDY21921	Canola	plastid	25.53	37.89
CDY60784	Canola	cytosol	22.52	37.8
CDY51540	Canola	nucleus	34.22	37.62
CDY22036	Canola	cytosol	39.72	37.58
CDY44574	Canola	cytosol	32.09	37.55
CDY63456	Canola	cytosol	26.24	37.47
CDY69979	Canola	nucleus	41.31	36.58
CDY52787	Canola	nucleus	40.78	36.45
CDY28703	Canola	cytosol	32.09	36.35
CDY52927	Canola	cytosol	23.94	35.81
CDY65338	Canola	cytosol	40.96	34.48
CDY36353	Canola	plastid	18.62	33.65
CDY22034	Canola	endoplasmic reticulum	37.41	33.55
CDY52789	Canola	cytosol	24.11	33.5
CDY63290	Canola	cytosol	29.61	33.27
CDY06776	Canola	cytosol	16.49	32.63
CDX93183	Canola	cytosol	38.12	32.28
CDY22883	Canola	cytosol	36.88	31.85
CDX71062	Canola	cytosol	35.11	31.63
CDX88733	Canola	cytosol	34.93	31.57
CDY09238	Canola	cytosol	26.42	31.37
CDY09240	Canola	cytosol	26.24	31.16
CDY29993	Canola	cytosol	34.04	31.12
CDY42579	Canola	nucleus	15.07	31.02
CDY48718	Canola	cytosol	20.39	31.0
CDY29992	Canola	cytosol	14.36	30.92
CDY21132	Canola	cytosol	33.33	30.72
CDY44167	Canola	cytosol	26.6	30.49
CDX67463	Canola	cytosol	24.65	29.96
CDY64703	Canola	cytosol	34.75	29.52
CDY43524	Canola	cytosol	26.42	29.45
CDY30007	Canola	cytosol, nucleus, plastid	34.22	29.02
CDY63460	Canola	cytosol, mitochondrion	21.1	28.61
CDY50383	Canola	cytosol	40.6	27.16
CDX74184	Canola	plasma membrane	19.68	27.07
CDY40661	Canola	cytosol	35.82	26.51
CDY22035	Canola	cytosol	41.31	26.3
CDX74183	Canola	cytosol	15.6	25.58
KRG95394	Soybean	nucleus	25.0	24.87
KRH67075	Soybean	nucleus	25.0	24.74
CDY22052	Canola	nucleus	27.66	24.64
CDY50382	Canola	cytosol	39.72	22.58
CDX82703	Canola	cytosol	36.88	21.55

Protein Annotations

MapMan:35.2	GO:A0A078GMZ1	UniProt:A0A078GMZ1	EnsemblPlants:CDY27940	ProteinID:CDY27940	ProteinID:CDY27940.1
InterPro:DC1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0035556
GO:GO:0046872	GO:GO:0047134	EnsemblPlantsGene:GSBRNA2T00038850001	InterPro:IPR002219	InterPro:PE/DAG-bd	PFAM:PF03107
PFscan:PS50081	PANTHER:PTHR32410	SMART:SM00109	SUPFAM:SSF57889	UniParc:UPI0004EF447A	SEG:seg

Description

BnaCnng05250DBnaCnng05250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMZ1]

Coordinates

chrLK032212:-:384507..387902

Molecular Weight (calculated)

64828.1 Da

IEP (calculated)

7.159

GRAVY (calculated)

-0.445

Length

564 amino acids

Sequence
(BLAST)

001: MGNMWGIFKP SHGASKPQIL PIHDHILKPS SFSVDCTGCS ETKNDADGYF CFECNFYVHK ECAESPLEIN HRSHSHPLKL RWCGPPGYSD KRCCLCGETL
101: GLLVYHCSTC NFSLDTACAR KHEIPSIDYP KAHEHRLHLL AKRVSFPCAC GEDVPGAPYV CHQCNFMIHR DCLLLPRVIY ITRHKHRISR RYFIGPGKFS
201: CKVCRLELDC MCGGYRCSTC PDYVVHLRCA TRDDVWDGID HYGKPEEEEE IEKPSEVVDD NLIKHFSHEH YLKFNEGGLV CHEATHCSAC ALPVYYYPYY
301: KCSVCDFVLH KTCAGLARKL RHELHKHTLT LRPNTNPDEE HRYNLFNCTA CQQLCSGFKY VCSKSCDVQI DVRCTSVKEP FNHGSHPHHK LYLTSSEAKF
401: CGACGVKTST VLNCVDCRFA LGYDCATLPN KVKHKCDRHF LSVCYGEEAS GKYWCEACEG EVQPSRRFYT CEDCSSTLHI KCVIGEFTFW RPGTMAISRF
501: EAEVIPNDFP SRPYCCMCQL RCEDTTDTVS KFEEDKERIY MRYEQQRLQN FQFIEENSRL SYGE

Best Arabidopsis Sequence Match ( AT4G01760.1 )
(BLAST)

001: MDSDGVSVPL IHEHLMMPCN DLRRGDCCER LEAISDGYYC TTCDFFVHKK CGDEASECIE NPFHSNHPLR LGFLSRLQRQ HWLKVVRSCD LCGKNIGDLF
101: YRCEICDFDM DLHCAKYPPL EVIDIPEMHS HKLNLLKDRV EFDCDAKCGK IGYGFPYECH ECDSKFHVDC VRYSSSEEVK HPLEVNHSYH SLHPLKLLMG
201: QPPDYSDGKC RLCGRKIDDK LFYHCSSCNF TLDMRCVLNP PPKSVLDLKT HDHQLNLLPR LIFFTCNACG LNGDRSPYAC FQCDFLIHKD CFGLPRLINI
301: NRHDHRISRT SLIGIVNSVC GVCRQKVDWT CGGYSCQRCS TYIAHSKCAT REDVWNGKEL EGVPEEIEDI EPYVVIDDNT IQHFSHKEHY MRLNVNGLMC
401: EVNKRCNACN HPISPQSFYG CMDCDFILHQ NCAGFPRRKW HVLHNERLAL VTSEVNIFGC SACHKIFNGF RYEHEDTKLD VLCGSFSEPF IHPSHPHHPL
501: YCISPEDDEV CSGCNERSYH VLRCIEDNCG FILDFGCATF PQVVKHRIED QPLSLCYGEK ASGKYWCDIC EKETNPNTWF YTCKDHRASL HTWCVLGDFM
601: GLIPKSTIEL WNISYEVVLN NSISRPICRH CKSHCIPPII LKKIGTSDPY FCSLDCIESF KRLWRAK

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSJ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.