CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52927	Canola	cytosol	48.25	47.48
CDX97701	Canola	cytosol	22.1	38.68
CDY29992	Canola	cytosol	26.95	38.17
CDY06776	Canola	cytosol	28.03	36.49
CDY52789	Canola	cytosol	38.01	34.73
CDX93183	Canola	cytosol	61.73	34.38
CDX67463	Canola	cytosol	42.05	33.62
CDY63460	Canola	cytosol, mitochondrion	37.2	33.17
CDX74184	Canola	plasma membrane	35.31	31.95
CDX74183	Canola	cytosol	28.57	30.81
CDY22052	Canola	nucleus	43.94	25.75
CDY28703	Canola	cytosol	33.69	25.1
CDY09238	Canola	cytosol	32.08	25.05
CDX88733	Canola	cytosol	42.05	25.0
CDX71062	Canola	cytosol	42.05	24.92
CDY52787	Canola	nucleus	42.32	24.88
CDY09240	Canola	cytosol	31.81	24.84
CDY22034	Canola	endoplasmic reticulum	42.05	24.8
CDY63456	Canola	cytosol	26.15	24.56
CDY21921	Canola	plastid	25.07	24.47
CDY51540	Canola	nucleus	33.69	24.37
CDY69979	Canola	nucleus	41.78	24.33
CDY65338	Canola	cytosol	43.94	24.33
CDY22036	Canola	cytosol	38.27	23.83
CDY41709	Canola	peroxisome	32.61	23.0
CDY46706	Canola	mitochondrion	32.61	22.7
CDX82703	Canola	cytosol	58.49	22.49
CDY64703	Canola	cytosol	40.16	22.44
CDY30007	Canola	cytosol, nucleus, plastid	40.16	22.41
CDY63290	Canola	cytosol	29.11	21.51
CDY22883	Canola	cytosol	37.74	21.44
CDY29993	Canola	cytosol	35.58	21.39
CDY36839	Canola	cytosol	34.77	21.32
CDY42579	Canola	nucleus	15.63	21.17
CDY43524	Canola	cytosol	28.84	21.15
CDY30196	Canola	cytosol	23.18	21.03
CDY21132	Canola	cytosol	33.96	20.59
CDY27940	Canola	cytosol	31.0	20.39
CDY58516	Canola	nucleus	27.49	20.32
CDY44167	Canola	cytosol	26.68	20.12
CDY40661	Canola	cytosol	41.24	20.08
CDY50383	Canola	cytosol	44.2	19.45
CDY22035	Canola	cytosol	42.32	17.72
CDY50382	Canola	cytosol	43.67	16.33
CDY27938	Canola	cytosol	18.33	15.49
CDY44574	Canola	cytosol	18.6	14.32
KRG95394	Soybean	nucleus	20.49	13.4
KRH67075	Soybean	nucleus	19.95	12.98
CDY60784	Canola	cytosol	11.32	12.5
CDY36353	Canola	plastid	9.97	11.86

Protein Annotations

EnsemblPlants:CDY48718	EnsemblPlantsGene:GSBRNA2T00091608001	GO:A0A078IHV7	GO:GO:0003674	GO:GO:0003824	GO:GO:0047134
InterPro:DC1	PFAM:PF03107	ProteinID:CDY48718	ProteinID:CDY48718.1	SEG:seg	SUPFAM:SSF57889
UniParc:UPI0004EEF929	UniProt:A0A078IHV7	MapMan:35.2	:	:	:

Description

BnaA09g09930DBnaA09g09930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHV7]

Coordinates

chrLK032788:-:35478..37731

Molecular Weight (calculated)

42601.2 Da

IEP (calculated)

6.460

GRAVY (calculated)

-0.442

Length

371 amino acids

Sequence
(BLAST)

001: MEKVDLPVHN HPLLPLTRFS HGRCKGCWSH GYIYGGYRCN DLCQVWFDTG YFCSICDFKL DLGCAWRPSP PLTLENTDTH EHHLVLSNGV GSELSQSTRN
101: CKVCSSEVLE FKQYYECHQC ELFFHVKCTK IYLDEYHTSH PEHPLKFLTG DETPGYADKK CLLCGVEFNQ ELHHCDVCNF SICRGCAGNP PPLSVMSSKT
201: HEHQLHLFPR LVDFTCNACG TRDCIDLPRI ININRHDHCI SYTRRLGHGD WTCGVCREKV DGFHGAYSCS VASKCSSSYV VHSKCAIRKD VWDQIELEGT
301: AEEEEVDDTT IKHFSHEHFL RLIEDGRILQ ENKLCEACVF QIQSESFYSC EQCDYILHEK CANISQNNKR H

Best Arabidopsis Sequence Match ( AT2G04680.1 )
(BLAST)

001: MEIVEVSPIH KHPLLPITRF SREHCKCNVC GSVGYIYGGY CCNEVGCESM FHKECVESLS EIKHTSHPDH PLKLLISDKA SFCSRCEGRF ENGYICSICD
101: FKLDFRCAKG PAPLLILEKS NLHEHLLEFF VGWHSWKGHR ECKACGGAGF RGYRWYGCYQ CDTLFHGECA EFFPEAKHTS HPQHTLKHIT SEEAPDYADN
201: KCLLCEEEFD QQHPKIHHCD VCNFTICRAC MKNAPPVRIE SLTTHEHQLH LVPRRIDFTC NACGTLGDRS PYFCLQCNFM IHRQCIDLPR VININRHDHR
301: ISYTRRLGHG EWKCKVCRKK VDGFYGAYTC LKCPSFVVHS LCATRNDVWD MIELEGMQEE EEIAPYEMID ANTIKHFSHD HNLQINNDGH GRIQPENIVC
401: EACVFQILSE PFYSCNQCSF ILHEKCANHP RKKRHVCNNT SFILFTDSCN KANASCGLCK QHFTGFRYES GPYVTIDVRC AAILDTIEHG SHQHPLYYYT
501: TFDWKPCSRC REEGAVLFRC DECDYILDGN CALFPKKVMR NRYDDHLLFL SFGDKNVSGD YWCEACETKV NPKEWFYTCN DCGTILHISC VVGDFSYIMP
601: GSHITTWRAN VVSNTSICRP VCYMCNSRCK LPSVLKLSDT KVDVYLCSFK CAYFIRK

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJ91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.