Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025591.1-P | Field mustard | nucleus | 99.79 | 81.39 |
| CDY36839 | Canola | cytosol | 92.95 | 74.05 |
| AT5G40320.1 | Thale cress | nucleus | 78.84 | 63.97 |
| CDY58516 | Canola | nucleus | 46.68 | 44.82 |
| CDY36353 | Canola | plastid | 24.69 | 38.14 |
| CDY27938 | Canola | cytosol | 32.16 | 35.31 |
| CDY41709 | Canola | peroxisome | 37.14 | 34.03 |
| CDY60784 | Canola | cytosol | 23.65 | 33.93 |
| CDY27940 | Canola | cytosol | 37.55 | 32.09 |
| CDY46706 | Canola | mitochondrion | 34.65 | 31.33 |
| CDY63456 | Canola | cytosol | 23.86 | 29.11 |
| CDY28703 | Canola | cytosol | 29.88 | 28.92 |
| CDY22036 | Canola | cytosol | 35.48 | 28.69 |
| CDY30196 | Canola | cytosol | 24.27 | 28.61 |
| CDY52787 | Canola | nucleus | 37.14 | 28.37 |
| CDY69979 | Canola | nucleus | 37.34 | 28.26 |
| CDY63290 | Canola | cytosol | 28.84 | 27.69 |
| CDY51540 | Canola | nucleus | 29.46 | 27.68 |
| CDY44167 | Canola | cytosol | 28.01 | 27.44 |
| CDY65338 | Canola | cytosol | 37.34 | 26.87 |
| CDX93183 | Canola | cytosol | 36.1 | 26.13 |
| CDY64703 | Canola | cytosol | 35.06 | 25.45 |
| CDY42579 | Canola | nucleus | 14.11 | 24.82 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 34.23 | 24.81 |
| CDY22883 | Canola | cytosol | 32.99 | 24.35 |
| CDY22034 | Canola | endoplasmic reticulum | 31.74 | 24.32 |
| CDY21132 | Canola | cytosol | 29.05 | 22.88 |
| CDY29993 | Canola | cytosol | 29.25 | 22.85 |
| CDY52927 | Canola | cytosol | 17.84 | 22.81 |
| CDY40661 | Canola | cytosol | 35.68 | 22.57 |
| CDY09238 | Canola | cytosol | 21.99 | 22.32 |
| CDX88733 | Canola | cytosol | 28.84 | 22.28 |
| CDX67463 | Canola | cytosol | 21.37 | 22.2 |
| CDY09240 | Canola | cytosol | 21.78 | 22.11 |
| CDY21921 | Canola | plastid | 17.43 | 22.11 |
| CDX71062 | Canola | cytosol | 28.63 | 22.04 |
| CDY43524 | Canola | cytosol | 22.82 | 21.74 |
| KRG95394 | Soybean | nucleus | 24.69 | 20.99 |
| KRH67075 | Soybean | nucleus | 24.69 | 20.88 |
| CDY22035 | Canola | cytosol | 37.55 | 20.43 |
| CDY50383 | Canola | cytosol | 35.48 | 20.28 |
| CDY48718 | Canola | cytosol | 14.32 | 18.6 |
| CDY63460 | Canola | cytosol, mitochondrion | 15.56 | 18.03 |
| CDY52789 | Canola | cytosol | 14.94 | 17.73 |
| CDX74184 | Canola | plasma membrane | 14.94 | 17.56 |
| CDY50382 | Canola | cytosol | 35.48 | 17.24 |
| CDY22052 | Canola | nucleus | 21.78 | 16.59 |
| CDX82703 | Canola | cytosol | 33.2 | 16.58 |
| CDX74183 | Canola | cytosol | 11.0 | 15.41 |
| CDX97701 | Canola | cytosol | 6.64 | 15.09 |
| CDY06776 | Canola | cytosol | 8.71 | 14.74 |
| CDY29992 | Canola | cytosol | 5.6 | 10.31 |
Protein Annotations
| MapMan:35.2 | GO:A0A078I523 | UniProt:A0A078I523 | EnsemblPlants:CDY44574 | ProteinID:CDY44574 | ProteinID:CDY44574.1 |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | GO:GO:0047134 |
| EnsemblPlantsGene:GSBRNA2T00080492001 | InterPro:IPR002219 | InterPro:PE/DAG-bd | PFAM:PF03107 | PFscan:PS50081 | PANTHER:PTHR32410 |
| SUPFAM:SSF57889 | UniParc:UPI0004EE846C | SEG:seg | : | : | : |
Description
BnaA04g10160DBnaA04g10160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I523]
Coordinates
chrLK032595:+:59991..61766
Molecular Weight (calculated)
55089.1 Da
IEP (calculated)
5.495
GRAVY (calculated)
-0.353
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLVEELSDV TTSHGENDDV SSYDDDDDSL TPSMVFDQIM GPTVMLASHE HPFYIHGSSN GHCDGCPERR DNGFFGYSCP TCDLTVHKEC AESSPEINHP
101: SHRRHPLTLF KHGLPLAAAD DKCRLCGEKL GKLVYHCSIC DFSIDLYCAR NPLELVVHYP KELEDEPEEN DECEEPFWVV SDGVINHFSH REHDLRLEDG
201: LANIHGEHTR CRACVRPVYS NSFYSCMHCD DFVLHETCAN LPRKQRHVLH NHQLTLYNDD SIVMDFPSTR GVFLCSACDR LCSGFRYECC NIKLDVRCGS
301: ISEPFLYECH PHPLFQTSIG SKICAVCKQE SVYVLSCLDC DFVLDFKCAT LPNRVRYKYD RKPLSLCYDG DKDVTGSYWC EICEGEMDQK IMFYTCESYG
401: STIDIHCVLG DFRYVKPRLQ FEFNGKKWKV ALNGINRPGC YKCGFRCKGP FVAVRVDYDN GVVCSLSCLW KGDTFEFVRR ID
101: SHRRHPLTLF KHGLPLAAAD DKCRLCGEKL GKLVYHCSIC DFSIDLYCAR NPLELVVHYP KELEDEPEEN DECEEPFWVV SDGVINHFSH REHDLRLEDG
201: LANIHGEHTR CRACVRPVYS NSFYSCMHCD DFVLHETCAN LPRKQRHVLH NHQLTLYNDD SIVMDFPSTR GVFLCSACDR LCSGFRYECC NIKLDVRCGS
301: ISEPFLYECH PHPLFQTSIG SKICAVCKQE SVYVLSCLDC DFVLDFKCAT LPNRVRYKYD RKPLSLCYDG DKDVTGSYWC EICEGEMDQK IMFYTCESYG
401: STIDIHCVLG DFRYVKPRLQ FEFNGKKWKV ALNGINRPGC YKCGFRCKGP FVAVRVDYDN GVVCSLSCLW KGDTFEFVRR ID
001: MVLVEELSDV SSPTNEANQA YSYDDDDDDD GSLTPSMVFD QIMGTSLMLP FHEHPVYNHY SSTGQCDGCP ELRENGLHGY NCNTCGLTVH KECAESSPEI
101: NHPSHQRHPL MLLTHGLPQE AEDDKCRLCG EKVGKLVYHC SICDFSLDLF CARNPLSLVV YFRKGHEHTL TLMPRLIRFT CNACGLESDR SPYICAQCDF
201: MIHEDCIYLP RVISIIRHEH RISRTYFLGS GDWKCGVCRR RMDGRYGAYS CSICPDYAVH SRCATRRDVW DGLELEDEPE DIEECEEPFR VVSDGVINHF
301: SHREHDLRLE DGLTNRHDEN IRCRACVRPV YANTFYSCMQ CDDFILHETC ANLPRKKRHV LHNHQLTLYP DDNIVMDFPM LRGVFLCTAC RRLCSGFRYE
401: CCNIKLDVRC GSISEPFFYE CHPHPLFQTS LDSKVCETCK EESDYVLTCM DCDYVLDFEC ATLPPTVRYK YDRHPLKLCY DGDKDMAGSY WCEICEKEMD
501: QNIIFYTCES SGPTIHIECV LGDFRYVKPR LHFEFNKKKW EVALNGINRP GCYKCGFRCK GPFVAVSVDY DISYVCSLLC LWKGETLVYG SIRD
101: NHPSHQRHPL MLLTHGLPQE AEDDKCRLCG EKVGKLVYHC SICDFSLDLF CARNPLSLVV YFRKGHEHTL TLMPRLIRFT CNACGLESDR SPYICAQCDF
201: MIHEDCIYLP RVISIIRHEH RISRTYFLGS GDWKCGVCRR RMDGRYGAYS CSICPDYAVH SRCATRRDVW DGLELEDEPE DIEECEEPFR VVSDGVINHF
301: SHREHDLRLE DGLTNRHDEN IRCRACVRPV YANTFYSCMQ CDDFILHETC ANLPRKKRHV LHNHQLTLYP DDNIVMDFPM LRGVFLCTAC RRLCSGFRYE
401: CCNIKLDVRC GSISEPFFYE CHPHPLFQTS LDSKVCETCK EESDYVLTCM DCDYVLDFEC ATLPPTVRYK YDRHPLKLCY DGDKDMAGSY WCEICEKEMD
501: QNIIFYTCES SGPTIHIECV LGDFRYVKPR LHFEFNKKKW EVALNGINRP GCYKCGFRCK GPFVAVSVDY DISYVCSLLC LWKGETLVYG SIRD
Arabidopsis Description
CHP-rich zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FNE5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.