CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63460	Canola	cytosol, mitochondrion	89.47	61.3
CDY43524	Canola	cytosol	72.63	40.91
CDY29992	Canola	cytosol	37.54	40.84
CDX97701	Canola	cytosol	28.77	38.68
CDY63456	Canola	cytosol	49.82	35.95
CDY46706	Canola	mitochondrion	57.89	30.96
CDY52789	Canola	cytosol	41.05	28.82
CDX74183	Canola	cytosol	34.04	28.2
CDY48718	Canola	cytosol	36.49	28.03
CDY30196	Canola	cytosol	38.25	26.65
CDX74184	Canola	plasma membrane	35.09	24.39
CDY52927	Canola	cytosol	31.93	24.14
CDY42579	Canola	nucleus	23.16	24.09
CDX67463	Canola	cytosol	36.14	22.2
CDY51540	Canola	nucleus	39.65	22.03
CDY21921	Canola	plastid	28.77	21.58
CDY22034	Canola	endoplasmic reticulum	47.02	21.3
CDY28703	Canola	cytosol	37.19	21.29
CDY22052	Canola	nucleus	45.26	20.38
CDY09240	Canola	cytosol	32.98	19.79
CDY09238	Canola	cytosol	32.98	19.79
CDY65338	Canola	cytosol	45.61	19.4
CDY69979	Canola	nucleus	43.16	19.31
CDY41709	Canola	peroxisome	35.44	19.2
CDY29993	Canola	cytosol	41.05	18.96
CDY52787	Canola	nucleus	41.75	18.86
CDY21132	Canola	cytosol	40.0	18.63
CDX88733	Canola	cytosol	40.0	18.27
CDX71062	Canola	cytosol	40.0	18.21
CDX93183	Canola	cytosol	41.4	17.72
CDY63290	Canola	cytosol	30.88	17.53
CDY36839	Canola	cytosol	37.19	17.52
CDY22036	Canola	cytosol	36.49	17.45
CDY64703	Canola	cytosol	38.6	16.57
CDY27940	Canola	cytosol	32.63	16.49
CDY22883	Canola	cytosol	37.54	16.39
CDY30007	Canola	cytosol, nucleus, plastid	37.19	15.94
CDY58516	Canola	nucleus	27.37	15.54
CDY50383	Canola	cytosol	45.26	15.3
CDY40661	Canola	cytosol	38.6	14.44
CDY44167	Canola	cytosol	24.91	14.43
CDY22035	Canola	cytosol	43.51	14.0
CDY27938	Canola	cytosol	20.35	13.21
CDY50382	Canola	cytosol	45.26	13.0
CDX82703	Canola	cytosol	40.7	12.02
CDY60784	Canola	cytosol	11.58	9.82
CDY36353	Canola	plastid	10.53	9.62
CDY44574	Canola	cytosol	14.74	8.71
KRG95394	Soybean	nucleus	15.09	7.58
KRH67075	Soybean	nucleus	14.39	7.19

Protein Annotations

EnsemblPlants:CDY06776	EnsemblPlantsGene:GSBRNA2T00123008001	GO:A0A078F043	InterPro:DC1	PANTHER:PTHR32410	PFAM:PF03107
ProteinID:CDY06776	ProteinID:CDY06776.1	SEG:seg	SUPFAM:SSF57889	UniParc:UPI0004EE7F38	MapMan:35.2

Description

BnaC01g08750D

Coordinates

chrLK031973:+:95190..97051

Molecular Weight (calculated)

33015.0 Da

IEP (calculated)

7.989

GRAVY (calculated)

-0.222

Length

285 amino acids

Sequence
(BLAST)

001: MIRIKLPTHK HPLYPTPWDL SDFNCGFCGE ESQGRCRYRC YLCRLEFEIR CSMLSLEIDY PYHPKHPLKF LTKEERHFSD GKCRICGKYL RWKFYHCSIC
101: KFSVDVDCVR DPPPLTILFP KAHEHQLSLT PRKISFDCDA CGMAGDRSPY SCQQCYFMIH QSCIDLPEII NVNRHEHRLS RRLHLSLGSW VCGFCHKNVD
201: WSYGAYSCSI CPNYVIHSKC AIRYDVWDKL ELKGIPEEPG DIEPFKVSSI PTFNTSVLML SVAHFLILSS MKVIHAPCTT TTGSV

Best Arabidopsis Sequence Match ( AT3G27480.1 )
(BLAST)

001: MTENVRGHEH LVSVVNQGDG MECDACDQLH VGGYSCSECK FNIHKKCVYV FTAKEIFDHP SHDGHCLKLL TTGAPDHTDP KCHLCGKNTK RLLYHCSDCK
101: LNLDIGCIAD HRSAPFHLNM SWHHHPLVLG LSYFDRCSFC HKIGNEDSKG YRCLRCGLVI HTRCTFIFDS PEITHPAHVR HPLKRLTDGA PNYTDQRCHI
201: CGENTGNLLY HCDICKFNLD MRCAIERPPP VALSNLKVHE HTLTLMPRLI SFVCDACGTK GDRSPYMCVQ CDFMTFHQKC ARLPRVIHVN HHDHRVSFKY
301: PLGPGEWRCG VCWEEIDWSY GAYSCSLCPN YAIHSLCATR KDVWDGIELD GVPEEIEDIE PFKRNDDSTI THCAHQHNLM SLRKDGEENS LCGACVRPIG
401: SYTFYKCSES ECIFILHEMC ANLRKKKRHF LSPEPLHLSV LEQSDDSPTA CSACLQVCSE GFVYDHDTYG TFDLLCSSID VPFIHGSHPH PLLYLKLQHG
501: HFKTCQSCGI DHTKVVIGCL KCNYFLDFRC ATLPLTVSLP RYDDHPLTLC YGEKSSDKYW CDICERETNT ETWFYTGSES GVTLHILCVL GDIRYLHCFR
601: LGRL

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4IWJ4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.