Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27940 | Canola | cytosol | 71.98 | 56.03 |
| CDY58516 | Canola | nucleus | 38.04 | 33.27 |
| CDY60784 | Canola | cytosol | 24.83 | 32.44 |
| CDY44574 | Canola | cytosol | 35.31 | 32.16 |
| CDY36839 | Canola | cytosol | 40.77 | 29.59 |
| CDY46706 | Canola | mitochondrion | 34.62 | 28.52 |
| CDY41709 | Canola | peroxisome | 33.71 | 28.14 |
| CDY30196 | Canola | cytosol | 25.28 | 27.14 |
| CDY22036 | Canola | cytosol | 35.31 | 26.01 |
| CDY36353 | Canola | plastid | 18.45 | 25.96 |
| CDY69979 | Canola | nucleus | 37.59 | 25.9 |
| CDY63456 | Canola | cytosol | 23.01 | 25.57 |
| CDY52787 | Canola | nucleus | 36.67 | 25.52 |
| CDX93183 | Canola | cytosol | 36.9 | 24.32 |
| CDY28703 | Canola | cytosol | 27.56 | 24.3 |
| CDY51540 | Canola | nucleus | 28.25 | 24.17 |
| CDY65338 | Canola | cytosol | 36.67 | 24.03 |
| CDY63290 | Canola | cytosol | 27.33 | 23.9 |
| CDY64703 | Canola | cytosol | 34.17 | 22.59 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 34.17 | 22.56 |
| CDY29993 | Canola | cytosol | 31.44 | 22.37 |
| CDY22883 | Canola | cytosol | 33.03 | 22.21 |
| CDY21132 | Canola | cytosol | 30.75 | 22.06 |
| CDX88733 | Canola | cytosol | 30.98 | 21.79 |
| CDX71062 | Canola | cytosol | 30.98 | 21.73 |
| CDY44167 | Canola | cytosol | 24.15 | 21.54 |
| CDY22034 | Canola | endoplasmic reticulum | 30.75 | 21.46 |
| CDY43524 | Canola | cytosol | 24.6 | 21.34 |
| CDY52927 | Canola | cytosol | 18.22 | 21.22 |
| CDY63460 | Canola | cytosol, mitochondrion | 19.82 | 20.91 |
| CDY21921 | Canola | plastid | 18.0 | 20.79 |
| CDY06776 | Canola | cytosol | 13.21 | 20.35 |
| CDY52789 | Canola | cytosol | 18.68 | 20.2 |
| KRG95394 | Soybean | nucleus | 25.74 | 19.93 |
| CDY40661 | Canola | cytosol | 34.4 | 19.82 |
| CDY09240 | Canola | cytosol | 21.41 | 19.79 |
| CDY09238 | Canola | cytosol | 21.41 | 19.79 |
| KRH67075 | Soybean | nucleus | 25.51 | 19.65 |
| CDX67463 | Canola | cytosol | 20.73 | 19.61 |
| CDY50383 | Canola | cytosol | 35.54 | 18.51 |
| CDY22035 | Canola | cytosol | 37.13 | 18.4 |
| CDX97701 | Canola | cytosol | 8.88 | 18.4 |
| CDY48718 | Canola | cytosol | 15.49 | 18.33 |
| CDY42579 | Canola | nucleus | 11.39 | 18.25 |
| CDY29992 | Canola | cytosol | 10.71 | 17.94 |
| CDX74184 | Canola | plasma membrane | 16.17 | 17.32 |
| CDY22052 | Canola | nucleus | 23.69 | 16.43 |
| CDX82703 | Canola | cytosol | 34.17 | 15.54 |
| CDY50382 | Canola | cytosol | 34.62 | 15.32 |
| CDX74183 | Canola | cytosol | 10.71 | 13.66 |
Protein Annotations
| MapMan:35.2 | GO:A0A078GTF9 | UniProt:A0A078GTF9 | EnsemblPlants:CDY27938 | ProteinID:CDY27938 | ProteinID:CDY27938.1 |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | GO:GO:0047134 |
| EnsemblPlantsGene:GSBRNA2T00038843001 | InterPro:IPR002219 | InterPro:PE/DAG-bd | PFAM:PF03107 | PFscan:PS50081 | PANTHER:PTHR32410 |
| SUPFAM:SSF57889 | UniParc:UPI0004EEDF3A | SEG:seg | : | : | : |
Description
BnaCnng05230DBnaCnng05230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTF9]
Coordinates
chrLK032212:-:361006..362748
Molecular Weight (calculated)
50189.7 Da
IEP (calculated)
6.161
GRAVY (calculated)
-0.206
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNIWGIFKP NHGASEPQKL PVHDHFLQPT SFIVDCSGCS ETKNDAQGYF CFECNFYVHK ECARSPLEIN HPSHSHPLKL RWCGPPSYSD KRCCLCGETL
101: RLLVYHCSTC NFSLDTAFCR LELNWRYGGY RCSICPDYVI HLRCATRDDV WDGIDLDGTL EEEEETEEPF QVACALPVYF DAFYICSVCD FVLHETCATL
201: PRKLRHELHK HTLTLRPNTT PDEEHGYNLF NCTVCQRLCS GFKYVCSKSC DVQIDVRCCS IRELFVHESH PQHPLFLTSS EPIDCGACNE IASPVLNCVD
301: CGFSLGYDCA TLPNKACERK VNPSTRFYTC EDCSSTLHIT CVIGEFTFWR PGKMAISRHE VAIIPNDFAS RPYCYMCRSR CEDTSGIIYI SEKHICSSKC
401: LEVYIKFDLT FSKLETVEMA LHNLELFRLD HTSHGWSIL
101: RLLVYHCSTC NFSLDTAFCR LELNWRYGGY RCSICPDYVI HLRCATRDDV WDGIDLDGTL EEEEETEEPF QVACALPVYF DAFYICSVCD FVLHETCATL
201: PRKLRHELHK HTLTLRPNTT PDEEHGYNLF NCTVCQRLCS GFKYVCSKSC DVQIDVRCCS IRELFVHESH PQHPLFLTSS EPIDCGACNE IASPVLNCVD
301: CGFSLGYDCA TLPNKACERK VNPSTRFYTC EDCSSTLHIT CVIGEFTFWR PGKMAISRHE VAIIPNDFAS RPYCYMCRSR CEDTSGIIYI SEKHICSSKC
401: LEVYIKFDLT FSKLETVEMA LHNLELFRLD HTSHGWSIL
001: MEKVEVPPIH NHPLLPFTRF SYKACKGCGY VGYIYGGYHC NELGCESVFH KECADPLPEI NHYSHPDHPL KLLINVEPLA SCSQCPSSFE NGYLCSICDF
101: KLDFRCATRL PLEFILEEST VHEHPIQLSD GTRDGFVQLC KTCKWGVFDA VHYKCNKCDL RFHVECTKLF PQASHVLHPQ HPLKLLRCEE APDYADNKCL
201: LCGNKFDGRI HHCDVCNFTI CGGCMENPPP LSVVSPTTHE HQLYLLSKPL GFTCNACGTQ ADQSPYFCLQ CNFMIHWECI DLPRVININR HDHRISYTRR
301: LGHGQNTCGV CRKKVDGFYG GYSCSKCSNY VVHSRCATDE DVWDMIELEG TPEEPEEDAP FEVIDDNTIK HFSHDHNLVI NKDGRILHES TLCKACVFQI
401: CSDAFYSCEN CDFILHQKCA NLPRKKRHVC DNLPFTLVTN DTSDETSCDL CWQSFTGFRY ECLTRMVTLD VRCGSIREPL VHQSHQHPLY FSKRSSKSCT
501: ECGKNMDLDI GSFSCDECDY SLDFKCALLP QKVKWHRYDD HPLYLSCGES SVDGEYWCEA CETKVNSKKW FYTCNDCGVI LHISCVVGDF SYYMPGSKIG
601: WEEDLVVSNT SMCRPFCYVC NSQCKLPSIV KVVSKADVVL YICSLNCYYN FNRSNNYSSS DW
101: KLDFRCATRL PLEFILEEST VHEHPIQLSD GTRDGFVQLC KTCKWGVFDA VHYKCNKCDL RFHVECTKLF PQASHVLHPQ HPLKLLRCEE APDYADNKCL
201: LCGNKFDGRI HHCDVCNFTI CGGCMENPPP LSVVSPTTHE HQLYLLSKPL GFTCNACGTQ ADQSPYFCLQ CNFMIHWECI DLPRVININR HDHRISYTRR
301: LGHGQNTCGV CRKKVDGFYG GYSCSKCSNY VVHSRCATDE DVWDMIELEG TPEEPEEDAP FEVIDDNTIK HFSHDHNLVI NKDGRILHES TLCKACVFQI
401: CSDAFYSCEN CDFILHQKCA NLPRKKRHVC DNLPFTLVTN DTSDETSCDL CWQSFTGFRY ECLTRMVTLD VRCGSIREPL VHQSHQHPLY FSKRSSKSCT
501: ECGKNMDLDI GSFSCDECDY SLDFKCALLP QKVKWHRYDD HPLYLSCGES SVDGEYWCEA CETKVNSKKW FYTCNDCGVI LHISCVVGDF SYYMPGSKIG
601: WEEDLVVSNT SMCRPFCYVC NSQCKLPSIV KVVSKADVVL YICSLNCYYN FNRSNNYSSS DW
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:TAIR;Acc:AT2G19660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.