CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028463.1-P	Field mustard	cytosol	92.89	80.41
CDY52927	Canola	cytosol	34.91	42.97
CDY48718	Canola	cytosol	33.62	42.05
CDX74184	Canola	plasma membrane	36.21	40.98
CDX97701	Canola	cytosol	18.1	39.62
AT3G45840.1	Thale cress	mitochondrion, nucleus, peroxisome, vacuole	47.84	37.56
CDY63460	Canola	cytosol, mitochondrion	32.76	36.54
CDY06776	Canola	cytosol	22.2	36.14
CDY29992	Canola	cytosol	20.04	35.5
CDX74183	Canola	cytosol	26.08	35.17
CDY09238	Canola	cytosol	34.48	33.68
CDY09240	Canola	cytosol	34.05	33.26
CDY52789	Canola	cytosol	29.09	33.25
CDX88733	Canola	cytosol	43.1	32.05
CDY64703	Canola	cytosol	45.26	31.63
CDY41709	Canola	peroxisome	35.56	31.37
CDX71062	Canola	cytosol	42.24	31.31
CDY30007	Canola	cytosol, nucleus, plastid	44.61	31.13
CDY46706	Canola	mitochondrion	33.62	29.27
CDY42579	Canola	nucleus	17.03	28.83
CDX93183	Canola	cytosol	41.16	28.68
CDY21921	Canola	plastid	22.84	27.89
CDY36839	Canola	cytosol	35.99	27.6
CDY63456	Canola	cytosol	23.49	27.59
CDY40661	Canola	cytosol	45.26	27.56
CDY22036	Canola	cytosol	35.34	27.52
CDY65338	Canola	cytosol	38.58	26.72
CDY28703	Canola	cytosol	28.66	26.71
CDY51540	Canola	nucleus	29.53	26.71
CDY52787	Canola	nucleus	36.21	26.62
CDY63290	Canola	cytosol	28.66	26.49
CDY58516	Canola	nucleus	28.23	26.1
CDY43524	Canola	cytosol	28.45	26.09
CDY22034	Canola	endoplasmic reticulum	35.34	26.07
CDY30196	Canola	cytosol	22.84	25.92
CDY22052	Canola	nucleus	35.34	25.91
CDY69979	Canola	nucleus	35.34	25.75
CDY27940	Canola	cytosol	29.96	24.65
CDY22883	Canola	cytosol	34.48	24.5
CDY21132	Canola	cytosol	31.47	23.86
CDY29993	Canola	cytosol	29.53	22.2
CDY44574	Canola	cytosol	22.2	21.37
CDY50383	Canola	cytosol	37.72	20.76
CDY27938	Canola	cytosol	19.61	20.73
CDY36353	Canola	plastid	13.58	20.19
CDX82703	Canola	cytosol	41.81	20.1
CDY44167	Canola	cytosol	20.69	19.51
CDY22035	Canola	cytosol	37.07	19.41
KRG95394	Soybean	nucleus	23.49	19.22
KRH67075	Soybean	nucleus	23.06	18.77
CDY50382	Canola	cytosol	37.5	17.54
CDY60784	Canola	cytosol	12.07	16.67

Protein Annotations

EnsemblPlants:CDX67463	EnsemblPlantsGene:GSBRNA2T00098566001	Gene3D:3.30.40.10	Gene3D:3.30.60.20	GO:A0A078BWS5	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0035556	InterPro:DC1	InterPro:IPR002219
InterPro:IPR013083	InterPro:PE/DAG-bd	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR32410	PFAM:PF03107	ProteinID:CDX67463
ProteinID:CDX67463.1	SMART:SM00109	SUPFAM:SSF57889	UniParc:UPI0004EDB916	MapMan:35.2	:

Description

BnaA07g15030D

Coordinates

chrLK031787:+:401934..403544

Molecular Weight (calculated)

52292.6 Da

IEP (calculated)

6.735

GRAVY (calculated)

-0.286

Length

464 amino acids

Sequence
(BLAST)

001: MDASSTKLPI HEHPLASSAR FHGHCQGCGK SGNYYGGYLC NDPECRIVMF HKECAESPLE INHPSHPEHP LLLTQNPPRS KCDLCGKYLF VHDFPYFYHC
101: SICDFNVDTS CARKPPLPLH HPDPQEPPFF LIKENQSQKL CRVCEQPVCG KYHYGRPSCD EYVHLECVDV AEKVKHLPFH PDHPLDMCLG CVITPPPLVI
201: EHPKTHEHQL TLSTRQISFT CNVCGVPDNR SSYSCLPCGF TVHRSCIDMP QVIIINRHNH RLSYTNHLGP GFSDCGVCRR PVDQLRGAYS CSICPTYAVH
301: SKCATTIRVW DGINLEGIPE EIEDLPFKVV GDDNMMINHF SHEEHNLRLT SENVISDETT LCAACVYPLN DSGPIYSCVE CDYFLHEKCA NLPMKIRHVS
401: YSGQFVLHAR GGEGPEVQFL NHLSMMAIYI PYIMNPKQAS PHVTHVKTQC SIIVDFSCAT LPKA

Best Arabidopsis Sequence Match ( AT3G45840.1 )
(BLAST)

001: MAILSIKLPI HIHPLSLSFR FHDRCEGCSF RNQGEYYGGY RCNDSDCNRV LFHKECAESP LEINHPSHPE HPLRLTERPP RYECDICGIH HLADVPYFYH
101: CSICDFNVDT SCARKPPPPP THDFQDLPFV FPKISGIYNC CGVCGHSVVA GKYYYSLPSR DQYAHLECIY HEKKVNLPFH PNHPLELTIS KSLPDDAEKA
201: CVLCGVRSEI VMYYCLICDF SMCLNCVRSP PPLTAKSLIY VFNVMLWSIE VVLAYRIESV SWGFICPKYV VHSQCATSYN VWDGIELEGI PEEAEDLPFK
301: VVGDNLINHF SHEKHNLRLT NEDIIYDESS RCEACIFPRN SGSIYCCDQC TFFLHEKCAH LPMKRRHLIY NRPFTLHARG KDLQIDWFSC DACGKQSTGF
401: RYISDDLMLD VHCSSVSEPF VHDGHVHPLY YKEEASTKCD SCHKLSYNML GCDVCDFSLD FCCANLPKTL KHKYDRHPLS LCYGEKASGK YCCDICETEM
501: DPSKWFYTCD DCVVTFHIDC VFGDFSRFIA GSIFETIIYT FEVVPTKDTT RQLCSQCHSR CKTPFILKAL SQTEDYCICS FKCLSSYFSK L

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4J6S4]
SUBAcon: [mitochondrion,peroxisome,nucleus,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.