Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06776 | Canola | cytosol | 40.84 | 37.54 |
| CDX97701 | Canola | cytosol | 28.63 | 35.38 |
| CDY21132 | Canola | cytosol | 78.24 | 33.5 |
| CDY29993 | Canola | cytosol | 77.86 | 33.06 |
| CDY63460 | Canola | cytosol, mitochondrion | 43.13 | 27.16 |
| CDY48718 | Canola | cytosol | 38.17 | 26.95 |
| CDY52789 | Canola | cytosol | 41.6 | 26.85 |
| CDY52927 | Canola | cytosol | 34.35 | 23.87 |
| CDX74183 | Canola | cytosol | 30.53 | 23.26 |
| CDX74184 | Canola | plasma membrane | 36.26 | 23.17 |
| AT2G43220.1 | Thale cress | peroxisome | 46.56 | 22.68 |
| CDY21921 | Canola | plastid | 31.3 | 21.58 |
| CDY43524 | Canola | cytosol | 39.69 | 20.55 |
| CDY63456 | Canola | cytosol | 30.53 | 20.25 |
| CDX67463 | Canola | cytosol | 35.5 | 20.04 |
| CDY42579 | Canola | nucleus | 20.61 | 19.71 |
| CDY51540 | Canola | nucleus | 38.55 | 19.69 |
| CDY28703 | Canola | cytosol | 35.88 | 18.88 |
| CDY22052 | Canola | nucleus | 44.27 | 18.33 |
| CDY22034 | Canola | endoplasmic reticulum | 42.75 | 17.81 |
| CDY52787 | Canola | nucleus | 42.37 | 17.59 |
| CDY69979 | Canola | nucleus | 41.98 | 17.27 |
| CDY09240 | Canola | cytosol | 31.3 | 17.26 |
| CDY09238 | Canola | cytosol | 31.3 | 17.26 |
| CDY65338 | Canola | cytosol | 43.51 | 17.01 |
| CDX93183 | Canola | cytosol | 42.75 | 16.82 |
| CDY46706 | Canola | mitochondrion | 33.97 | 16.7 |
| CDY22036 | Canola | cytosol | 37.4 | 16.44 |
| CDY41709 | Canola | peroxisome | 31.3 | 15.59 |
| CDY63290 | Canola | cytosol | 29.77 | 15.54 |
| CDX88733 | Canola | cytosol | 36.64 | 15.38 |
| CDY36839 | Canola | cytosol | 35.5 | 15.37 |
| CDX71062 | Canola | cytosol | 35.88 | 15.02 |
| CDY30196 | Canola | cytosol | 23.28 | 14.91 |
| CDY27940 | Canola | cytosol | 30.92 | 14.36 |
| CDY64703 | Canola | cytosol | 35.5 | 14.01 |
| CDY22883 | Canola | cytosol | 33.97 | 13.63 |
| CDY58516 | Canola | nucleus | 25.95 | 13.55 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 34.35 | 13.53 |
| CDY50383 | Canola | cytosol | 43.51 | 13.52 |
| CDY40661 | Canola | cytosol | 37.02 | 12.73 |
| CDY22035 | Canola | cytosol | 41.98 | 12.42 |
| CDX82703 | Canola | cytosol | 42.75 | 11.61 |
| CDY50382 | Canola | cytosol | 42.75 | 11.29 |
| CDY27938 | Canola | cytosol | 17.94 | 10.71 |
| CDY44167 | Canola | cytosol | 19.85 | 10.57 |
| CDY36353 | Canola | plastid | 8.78 | 7.37 |
| CDY60784 | Canola | cytosol | 9.16 | 7.14 |
| KRG95394 | Soybean | nucleus | 15.27 | 7.05 |
| KRH67075 | Soybean | nucleus | 15.27 | 7.02 |
| CDY44574 | Canola | cytosol | 10.31 | 5.6 |
Protein Annotations
| MapMan:35.2 | GO:A0A078GXN2 | UniProt:A0A078GXN2 | EnsemblPlants:CDY29992 | ProteinID:CDY29992 | ProteinID:CDY29992.1 |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | GO:GO:0047134 |
| EnsemblPlantsGene:GSBRNA2T00044514001 | InterPro:IPR002219 | InterPro:PE/DAG-bd | PFAM:PF03107 | PFscan:PS50081 | PANTHER:PTHR32410 |
| SUPFAM:SSF57889 | UniParc:UPI0001CAA6B1 | SEG:seg | : | : | : |
Description
BnaC01g40160DBnaC01g40160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXN2]
Coordinates
chrLK032247:-:328742..329530
Molecular Weight (calculated)
30427.2 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.460
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRIDEHFWS PAHSHELSED DLWKIIDIVK EENLFRSPVL YFCCDCLEPI ADNDRRCRCS LCTKQWHLRC IPASPDDIHH PFHSYHPLKL LIDVPPHNSK
101: RECDACQEEL QSYFYHCSMC DFSMHVRCSK DPPPPIVETA KCHEHTLTCM VRNDTFTCNA CGTHGERCPY VCAPCGVMFH RECINLPHVI NINRHDHRVS
201: HTYSLGFGKR KCMICHKKVD WRYGAYSCSK CPDYYVVHSK CATRVDVWDG EELEGVAEGA AH
101: RECDACQEEL QSYFYHCSMC DFSMHVRCSK DPPPPIVETA KCHEHTLTCM VRNDTFTCNA CGTHGERCPY VCAPCGVMFH RECINLPHVI NINRHDHRVS
201: HTYSLGFGKR KCMICHKKVD WRYGAYSCSK CPDYYVVHSK CATRVDVWDG EELEGVAEGA AH
001: MDMYEYEISR IPRVKIPCSH PLVSWWLMHT GSGDPHEYLP CDGCGDTEGN AIYCKICKFR AHFECIIQPD IINHPCHSKH PLKKVLAETI DYTDGNCHFC
101: RSPLDEVMYH CSICNISIDL SCWIYPPPLT IYQPKSHNHT FTLMARKDSF TCNACGLVGD RNPYVCLECD FMLHKDCIDL PRVININRHD HRISRTYHLG
201: QGDWECGVCR KQIDWTFGGY SCKRCPSYAV HSKCATRGDV WEGEELEDEP EEEEIEDPYK FLLHKVCATL PRKKRNILHN HKLDLQIQGK PGEVF
101: RSPLDEVMYH CSICNISIDL SCWIYPPPLT IYQPKSHNHT FTLMARKDSF TCNACGLVGD RNPYVCLECD FMLHKDCIDL PRVININRHD HRISRTYHLG
201: QGDWECGVCR KQIDWTFGGY SCKRCPSYAV HSKCATRGDV WEGEELEDEP EEEEIEDPYK FLLHKVCATL PRKKRNILHN HKLDLQIQGK PGEVF
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q2V4G4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.