Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001113.1-P | Field mustard | cytosol | 90.12 | 67.25 |
| CDX74184 | Canola | plasma membrane | 48.84 | 40.98 |
| CDY63290 | Canola | cytosol | 52.33 | 35.86 |
| CDX97701 | Canola | cytosol | 21.8 | 35.38 |
| CDY06776 | Canola | cytosol | 28.2 | 34.04 |
| CDY09238 | Canola | cytosol | 43.6 | 31.58 |
| CDY09240 | Canola | cytosol | 43.31 | 31.37 |
| CDY29992 | Canola | cytosol | 23.26 | 30.53 |
| CDY40661 | Canola | cytosol | 66.86 | 30.18 |
| CDY64703 | Canola | cytosol | 56.98 | 29.52 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 56.1 | 29.02 |
| CDY48718 | Canola | cytosol | 30.81 | 28.57 |
| AT4G01350.1 | Thale cress | cytosol | 53.49 | 28.22 |
| AT5G59940.1 | Thale cress | cytosol | 52.33 | 27.65 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 52.03 | 27.29 |
| AT5G59920.1 | Thale cress | cytosol | 55.52 | 26.9 |
| CDX88733 | Canola | cytosol | 48.26 | 26.6 |
| CDX71062 | Canola | cytosol | 47.67 | 26.2 |
| CDX67463 | Canola | cytosol | 35.17 | 26.08 |
| CDY52789 | Canola | cytosol | 30.52 | 25.86 |
| CDY52927 | Canola | cytosol | 27.91 | 25.46 |
| CDY41709 | Canola | peroxisome | 37.5 | 24.52 |
| CDY63460 | Canola | cytosol, mitochondrion | 29.65 | 24.52 |
| CDY51540 | Canola | nucleus | 34.59 | 23.2 |
| CDY21921 | Canola | plastid | 25.58 | 23.16 |
| CDY28703 | Canola | cytosol | 33.43 | 23.09 |
| CDY63456 | Canola | cytosol | 24.71 | 21.52 |
| CDY22052 | Canola | nucleus | 38.95 | 21.17 |
| CDY22034 | Canola | endoplasmic reticulum | 38.08 | 20.83 |
| CDY30196 | Canola | cytosol | 24.13 | 20.29 |
| CDY65338 | Canola | cytosol | 37.79 | 19.4 |
| CDX93183 | Canola | cytosol | 37.21 | 19.22 |
| CDY52787 | Canola | nucleus | 34.88 | 19.02 |
| CDY42579 | Canola | nucleus | 15.12 | 18.98 |
| CDY21132 | Canola | cytosol | 33.43 | 18.79 |
| CDY46706 | Canola | mitochondrion | 28.78 | 18.57 |
| CDY69979 | Canola | nucleus | 34.3 | 18.52 |
| CDY43524 | Canola | cytosol | 27.03 | 18.38 |
| CDY22036 | Canola | cytosol | 31.4 | 18.12 |
| CDY29993 | Canola | cytosol | 31.98 | 17.83 |
| CDY44167 | Canola | cytosol | 25.0 | 17.48 |
| CDY36839 | Canola | cytosol | 30.52 | 17.36 |
| CDY22883 | Canola | cytosol | 31.98 | 16.85 |
| CDY50383 | Canola | cytosol | 38.37 | 15.66 |
| CDY27940 | Canola | cytosol | 25.58 | 15.6 |
| CDY58516 | Canola | nucleus | 22.38 | 15.34 |
| CDY36353 | Canola | plastid | 12.79 | 14.1 |
| CDY22035 | Canola | cytosol | 34.59 | 13.43 |
| CDY50382 | Canola | cytosol | 37.79 | 13.1 |
| CDX82703 | Canola | cytosol | 36.63 | 13.06 |
| CDY60784 | Canola | cytosol | 11.92 | 12.2 |
| CDY44574 | Canola | cytosol | 15.41 | 11.0 |
| CDY27938 | Canola | cytosol | 13.66 | 10.71 |
| KRG95394 | Soybean | nucleus | 16.57 | 10.05 |
| KRH67075 | Soybean | nucleus | 16.57 | 10.0 |
Protein Annotations
| EnsemblPlants:CDX74183 | EnsemblPlantsGene:GSBRNA2T00111946001 | GO:A0A078CGS4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0047134 |
| InterPro:DC1 | PANTHER:PTHR32410 | PFAM:PF03107 | ProteinID:CDX74183 | ProteinID:CDX74183.1 | SUPFAM:SSF57889 |
| UniParc:UPI0004EDCBE8 | MapMan:35.2 | : | : | : | : |
Description
BnaA03g28640D
Coordinates
chrLK031800:+:1682142..1683622
Molecular Weight (calculated)
39472.0 Da
IEP (calculated)
8.177
GRAVY (calculated)
-0.175
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MCHDHSLVFM KKREVDVPCE ACKESIGGPS YSCLECHNVY FHLDCVHLQK EVNHPCHPSH PLKVVALADN QDAEKSSHFC VFQPEKKVCY HCSVCNFTMC
101: FGCLKNPPPL VIENTKTHKH PLRLLLSRIA FTCKVCGIQG YRSKPYICVK CDFLVHGDCI GLPRVININR HDHQISFTQH LGRRGTQCGF CWRDVSQYYG
201: AYFCSVCPNY TVHSLCPFIY NAWNGVNLEG IPERSEDISP FKVVGHNLVH LFSHNKHTLR LVKDNVDIQD DECIRCEACI HPCANLPMMK IFLFNRAAYM
301: LECDRSATYC KLCGMLCAGF RRFLTSQTRR SLYIIREKRI QSGP
101: FGCLKNPPPL VIENTKTHKH PLRLLLSRIA FTCKVCGIQG YRSKPYICVK CDFLVHGDCI GLPRVININR HDHQISFTQH LGRRGTQCGF CWRDVSQYYG
201: AYFCSVCPNY TVHSLCPFIY NAWNGVNLEG IPERSEDISP FKVVGHNLVH LFSHNKHTLR LVKDNVDIQD DECIRCEACI HPCANLPMMK IFLFNRAAYM
301: LECDRSATYC KLCGMLCAGF RRFLTSQTRR SLYIIREKRI QSGP
001: MATTAVNLPI HEHPLYPSAR CIIGECDGCH VNGYMYNGYF CNEPFCFIWF HKECAEAPAE ISHSSHHQHP LLLTNDSIDG PCDLCGQKLL PPCYSCSTCE
101: FKVDLTCAMK PSPPAIEHPL CHHHSLVFLK KREEKVSCEL CKDSIAGPSY SCLECDVYFH VNCIQLSKEV NHPCHSAHPL KLIPFESLTD DAETTCLLCG
201: KKPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHIKTHKHP LILFPRRIPC ICDICGKKCE FAVYVCPQCD FVTARGCIDL ARVININRHD HRIYLTHHLG
301: TGYSKCGVCH ENVNQYKGAY SCSVCPHYAV HSTCAVRTDV WDGVELEGTT EITEDNSPFK VVGDNLICHF SHEEHPLRFQ KDDVFIHDEH KRCAACIHPL
401: GFGSIYCCET CPFILHEKCA NLPMKKRLVF GTRPYTLMKE TTQLTDCTLC GIFSDGFAYS SRWLDVDVHC GSLNEPLVHD CHIHPLNFDK MEGHFCDGCK
501: KNIDDYMLRC KACDFDLCLY CATLPKKIWH RNDGHPLTLC CEEKEEASDK YWCDICEKEL DPSIWFYTCF DCGVTLHAQC VLGDFSRLVL GQNYWFGEKV
601: KFGAVPNNRN TRPLCIQCQS RCKVSVILKE RNEYNRYICS RSCLLSYLGE KI
101: FKVDLTCAMK PSPPAIEHPL CHHHSLVFLK KREEKVSCEL CKDSIAGPSY SCLECDVYFH VNCIQLSKEV NHPCHSAHPL KLIPFESLTD DAETTCLLCG
201: KKPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHIKTHKHP LILFPRRIPC ICDICGKKCE FAVYVCPQCD FVTARGCIDL ARVININRHD HRIYLTHHLG
301: TGYSKCGVCH ENVNQYKGAY SCSVCPHYAV HSTCAVRTDV WDGVELEGTT EITEDNSPFK VVGDNLICHF SHEEHPLRFQ KDDVFIHDEH KRCAACIHPL
401: GFGSIYCCET CPFILHEKCA NLPMKKRLVF GTRPYTLMKE TTQLTDCTLC GIFSDGFAYS SRWLDVDVHC GSLNEPLVHD CHIHPLNFDK MEGHFCDGCK
501: KNIDDYMLRC KACDFDLCLY CATLPKKIWH RNDGHPLTLC CEEKEEASDK YWCDICEKEL DPSIWFYTCF DCGVTLHAQC VLGDFSRLVL GQNYWFGEKV
601: KFGAVPNNRN TRPLCIQCQS RCKVSVILKE RNEYNRYICS RSCLLSYLGE KI
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JI14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.