Factsheet for AT5G59920.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

endoplasmic reticulum 1
golgi 1
extracellular 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G01350.1	Thale cress	cytosol	77.18	84.05
AT5G59940.1	Thale cress	cytosol	59.44	64.82
AT5G59930.1	Thale cress	cytosol, nucleus, plasma membrane	56.06	60.67
CDY30007	Canola	cytosol, nucleus, plastid	54.23	57.89
CDY64703	Canola	cytosol	53.66	57.38
CDX74184	Canola	plasma membrane	33.1	57.32
CDX74183	Canola	cytosol	26.9	55.52
Bra001113.1-P	Field mustard	cytosol	35.35	54.45
AT5G22355.1	Thale cress	cytosol	49.86	53.31
CDY63290	Canola	cytosol	37.04	52.39
CDY40661	Canola	cytosol	54.23	50.52
AT3G48400.1	Thale cress	cytosol	42.68	48.95
AT3G45840.1	Thale cress	mitochondrion, nucleus, peroxisome, vacuole	39.58	47.55
AT4G01925.1	Thale cress	cytosol	18.17	46.07
AT4G11540.1	Thale cress	cytosol	32.68	44.19
AT4G02190.1	Thale cress	cytosol	40.42	43.55
AT4G01910.1	Thale cress	cytosol	39.44	43.01
AT4G01930.1	Thale cress	cytosol	38.87	42.33
AT4G11550.1	Thale cress	cytosol	39.58	42.07
AT1G58037.1	Thale cress	cytosol	20.14	41.69
AT4G01920.1	Thale cress	cytosol	38.31	41.34
AT3G46810.1	Thale cress	cytosol	39.72	41.11
AT5G37620.1	Thale cress	cytosol	37.75	41.1
AT2G19660.2	Thale cress	nucleus	39.58	40.72
AT5G45730.1	Thale cress	nucleus	32.11	40.71
AT4G01740.1	Thale cress	cytosol	37.32	40.64
AT2G04680.1	Thale cress	cytosol	37.46	40.49
AT1G65180.1	Thale cress	nucleus	37.18	40.43
AT4G01760.1	Thale cress	cytosol	37.61	40.03
AT3G06990.1	Thale cress	nucleus	30.28	39.89
AT3G27510.1	Thale cress	cytosol	24.65	39.77
AT3G46800.1	Thale cress	cytosol	38.17	39.74
AT4G16015.1	Thale cress	cytosol	29.86	39.63
AT4G14980.1	Thale cress	cytosol	30.28	39.45
AT3G07000.1	Thale cress	cytosol	31.83	39.37
AT5G40320.1	Thale cress	nucleus	32.82	39.23
AT5G44770.1	Thale cress	cytosol, nucleus, peroxisome	29.86	39.19
AT3G27473.1	Thale cress	cytosol	36.2	38.82
AT2G43220.1	Thale cress	peroxisome	29.3	38.66
AT5G54050.1	Thale cress	nucleus	31.41	38.45
AT5G54030.1	Thale cress	cytosol	22.68	38.42
AT2G04500.1	Thale cress	cytosol	26.76	38.38
AT3G27480.1	Thale cress	cytosol, nucleus, peroxisome	32.54	38.24
AT3G43890.1	Thale cress	cytosol	35.49	38.12
AT2G19650.1	Thale cress	cytosol	36.48	37.98
AT1G69150.1	Thale cress	cytosol	27.61	37.91
AT3G28650.1	Thale cress	cytosol	35.21	37.59
AT5G29624.1	Thale cress	cytosol	25.63	37.3
AT3G27500.1	Thale cress	cytosol	36.06	36.99
AT3G45530.1	Thale cress	cytosol	36.06	36.99
AT5G54020.2	Thale cress	nucleus	30.56	36.9
AT5G42840.1	Thale cress	cytosol	34.79	36.81
AT4G13992.1	Thale cress	mitochondrion	33.1	36.6
AT5G54040.1	Thale cress	cytosol	30.56	36.41
AT3G27490.1	Thale cress	cytosol	34.37	35.78
AT4G11390.2	Thale cress	cytosol	27.46	35.71
AT4G02180.1	Thale cress	cytosol	39.01	28.01
KRG95394	Soybean	nucleus	22.25	27.87
KRH67075	Soybean	nucleus	21.41	26.67

Protein Annotations

MapMan:35.2	EntrezGene:836114	ProteinID:AAL37222.1	ProteinID:AED97251.1	ArrayExpress:AT5G59920	EnsemblPlantsGene:AT5G59920
RefSeq:AT5G59920	TAIR:AT5G59920	RefSeq:AT5G59920-TAIR-G	EnsemblPlants:AT5G59920.1	TAIR:AT5G59920.1	InterPro:DC1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008289	GO:GO:0009411	GO:GO:0009628
GO:GO:0009987	GO:GO:0010224	GO:GO:0019992	GO:GO:0020037	GO:GO:0035556	GO:GO:0046872
InterPro:IPR002219	RefSeq:NP_200800.1	InterPro:PE/DAG-bd	PFAM:PF03107	PO:PO:0000293	PO:PO:0009006
PFscan:PS50081	UniProt:Q8W2D2	SMART:SM00109	SMART:SM00249	SUPFAM:SSF57889	Symbol:ULI3
UniParc:UPI00000AB5F6	InterPro:Znf_PHD	SEG:seg	:	:	:

Description

ULI3Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q8W2D2]

Coordinates

chr5:+:24128491..24131081

Molecular Weight (calculated)

79920.0 Da

IEP (calculated)

4.734

GRAVY (calculated)

-0.320

Length

710 amino acids

Sequence
(BLAST)

001: MATEAVDLPI HEHPLFPSAR CIDDECDGCH VNGFMYAGYF CNEPYCYVWF HKDCAEAPGE ISHSSHPEHP LLLTNDSKDG PCDLCGQKLL TPCYSCPTCE
101: FKVDLTCGMK PSPPAIEHPL CHDHAVVFLK IREEKVPCEL CKESIEGPSY SCLECDMYFH VNCVHLSEEV NHPCHSIHPL KLITSESLTD DAEKSCLLCG
201: NIPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHMKTHKHP LTLLPRRISC ICDVCGKKCQ FTAYVCLQCD FVTARKCIDR PRVININRHD HRIYLTHHLG
301: TGYSECGVCH KNVSQYKGAY SCSVCPNYAV HSTCAVRTDV WDGVELEGTT EITEDISPFK VVGDNLICHF SHEEHQLKLH KEDVIHDERR RCEACIHPVQ
401: FGSIYVCEEE ECCFVLHEKC ANLPMKKRLV FGTRPYTLMK ETTEITHCEL CGILSDGFAY SSHEWSDVDV HCGSLNEPLV HDGHIHPLYF AKKEEHTCDG
501: CQKSIEDYML RCKACDFDLC LYCATLPEKI WHRNDGHPLT LCCGEKEEAS GKYWCDICEK ELDPSIWFYT CYDCGVTLHA QCVLGDFSRL VLGQIYSFGE
601: KEIEFEAVPN NINTRPFCIQ CNSRCKVSVI LKILKDSEDG SDDGSDDVSD DVSDDPSNDV SDDTSDDDSD VVSDVVSDDA SNDDSDDTSD DHNGYICSRS
701: CLSSYLGEEI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.