Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G27473.1 Thale cress cytosol 69.17 69.49
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 62.56 68.87
AT3G27510.1 Thale cress cytosol 44.51 67.27
AT5G42840.1 Thale cress cytosol 66.62 66.02
AT3G45530.1 Thale cress cytosol 66.92 64.31
AT3G27500.1 Thale cress cytosol 66.62 64.02
AT3G27490.1 Thale cress cytosol 63.46 61.88
AT4G01925.1 Thale cress cytosol 19.25 45.71
AT4G11540.1 Thale cress cytosol 34.74 44.0
AT4G01930.1 Thale cress cytosol 41.2 42.02
AT4G11550.1 Thale cress cytosol 41.95 41.77
AT4G01910.1 Thale cress cytosol 40.45 41.32
AT4G01920.1 Thale cress cytosol 40.6 41.03
AT4G01740.1 Thale cress cytosol 40.15 40.95
AT2G43220.1 Thale cress peroxisome 33.08 40.89
AT4G01760.1 Thale cress cytosol 40.75 40.63
AT5G40320.1 Thale cress nucleus 36.24 40.57
AT5G45730.1 Thale cress nucleus 34.14 40.54
AT2G04500.1 Thale cress cytosol 29.77 40.0
AT4G16015.1 Thale cress cytosol 32.18 40.0
AT1G58037.1 Thale cress cytosol 20.6 39.94
AT5G22355.1 Thale cress cytosol 39.55 39.61
AT4G02190.1 Thale cress cytosol 39.1 39.45
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 32.03 39.37
AT3G06990.1 Thale cress nucleus 31.73 39.15
AT3G46810.1 Thale cress cytosol 40.3 39.07
AT3G07000.1 Thale cress cytosol 33.53 38.85
AT3G46800.1 Thale cress cytosol 39.55 38.56
AT1G65180.1 Thale cress nucleus 37.74 38.44
AT3G48400.1 Thale cress cytosol 35.49 38.13
AT4G01350.1 Thale cress cytosol 37.14 37.88
AT5G37620.1 Thale cress cytosol 37.14 37.88
AT2G04680.1 Thale cress cytosol 37.29 37.75
AT5G54030.1 Thale cress cytosol 23.76 37.71
AT4G14980.1 Thale cress cytosol 30.68 37.43
AT2G19660.2 Thale cress nucleus 38.8 37.39
AT5G54050.1 Thale cress nucleus 32.48 37.24
AT3G43890.1 Thale cress cytosol 36.99 37.22
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 36.54 37.04
AT2G19650.1 Thale cress cytosol 37.44 36.51
AT1G69150.1 Thale cress cytosol 28.27 36.36
AT4G11390.2 Thale cress cytosol 29.77 36.26
AT5G54040.1 Thale cress cytosol 32.48 36.24
AT4G13992.1 Thale cress mitochondrion 34.89 36.14
AT5G29624.1 Thale cress cytosol 26.32 35.86
AT5G59940.1 Thale cress cytosol 35.04 35.79
AT5G54020.2 Thale cress nucleus 31.58 35.71
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 31.73 35.7
AT5G59920.1 Thale cress cytosol 37.59 35.21
AT4G02180.1 Thale cress cytosol 40.15 27.0
KRG95394 Soybean nucleus 22.11 25.93
KRH67075 Soybean nucleus 22.11 25.79
Protein Annotations
Gene3D:3.30.60.20MapMan:35.2EntrezGene:822495ProteinID:AEE77470.1ArrayExpress:AT3G28650EnsemblPlantsGene:AT3G28650
RefSeq:AT3G28650TAIR:AT3G28650RefSeq:AT3G28650-TAIR-GEnsemblPlants:AT3G28650.1TAIR:AT3G28650.1ProteinID:BAB02181.1
InterPro:DC1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0035556GO:GO:0046872
InterPro:IPR002219RefSeq:NP_189506.1InterPro:PE/DAG-bdPFAM:PF03107PFscan:PS50081UniProt:Q9LJJ0
SMART:SM00109SMART:SM00249SUPFAM:SSF57889UniParc:UPI00000A7EC1InterPro:Znf_PHD:
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9LJJ0]
Coordinates
chr3:+:10735637..10738397
Molecular Weight (calculated)
77064.8 Da
IEP (calculated)
7.706
GRAVY (calculated)
-0.301
Length
665 amino acids
Sequence
(BLAST)
001: MSLRLEKHEH YVDLVKQRDG LECDVCDRSY GDGFYCSECK FTVHRKCAVV FLLKDIFDHP SHVGHYLKLL TTGAPDHTDP KCHLCGKNTK RILYHCSICK
101: LNLDIDCIFD YFSDQQAHLN FSWHHHPLHF ISFRLHLQCD VCYMFRRKGY FCFQCKLVVH KECVSKIESA VITHPFHARH PLKLLTDGAP DYTDPKCHIC
201: GVETANLLYH CDMCMFNLDI GCAIRNPERV SLSKLKVHEH TLTLMPKLMF FVCDACGMKG DHAPYVCVQC DFMFFHQKCA YLPRVINVNH HEHRVSYKYP
301: LGPGDWICGV CWEEINWSYG AYSCSSCPNY AIHSRCATRK DVWDGKELDG VPELIEDIKP FKMNDDNTIT HFAHGHNLSL NKDTEEGSFC EACVLPIDSY
401: TSYKCSKSDC CFILHETCAN FPKKKRHFLS PEPLTLRPQN QRKKESICRA CDQVFCQGFV YSTYRKRNFD LLCSSITMPF KHRSHDHHLL YLKLEVDHTK
501: TCQNCGIDEK EVVLGCLKCN YFLDFRCATL PYTVRLPRYD DHPLTLCYGE KASGKYWCDI CERETNSKTW FYTCKGCGVT LHVFCVLGDI RYAKPGGSIN
601: NNVELVPNNR SSRPLCHNCH CHCPGPFILK DFVEECFCSY YCFSRCKSWM SIVKKEKGIC PPWAL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.