Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G43890.1 | Thale cress | cytosol | 83.37 | 65.2 |
| AT4G01925.1 | Thale cress | cytosol | 27.85 | 51.43 |
| AT1G65180.1 | Thale cress | nucleus | 61.51 | 48.7 |
| AT1G58037.1 | Thale cress | cytosol | 28.82 | 43.44 |
| AT4G11540.1 | Thale cress | cytosol | 43.33 | 42.67 |
| AT4G01930.1 | Thale cress | cytosol | 49.32 | 39.11 |
| AT4G01760.1 | Thale cress | cytosol | 49.13 | 38.08 |
| AT4G01910.1 | Thale cress | cytosol | 47.39 | 37.63 |
| AT4G11550.1 | Thale cress | cytosol | 48.16 | 37.28 |
| AT4G01920.1 | Thale cress | cytosol | 47.2 | 37.08 |
| AT4G02190.1 | Thale cress | cytosol | 45.84 | 35.96 |
| AT4G01740.1 | Thale cress | cytosol | 44.49 | 35.28 |
| AT5G54030.1 | Thale cress | cytosol | 28.43 | 35.08 |
| AT2G43220.1 | Thale cress | peroxisome | 35.2 | 33.83 |
| AT4G16015.1 | Thale cress | cytosol | 34.62 | 33.46 |
| AT5G45730.1 | Thale cress | nucleus | 34.62 | 31.96 |
| AT3G06990.1 | Thale cress | nucleus | 32.88 | 31.54 |
| AT3G48400.1 | Thale cress | cytosol | 37.72 | 31.5 |
| AT5G22355.1 | Thale cress | cytosol | 40.23 | 31.33 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 36.56 | 31.29 |
| AT3G07000.1 | Thale cress | cytosol | 34.43 | 31.01 |
| AT3G27510.1 | Thale cress | cytosol | 26.11 | 30.68 |
| AT2G04500.1 | Thale cress | cytosol | 29.01 | 30.3 |
| AT5G40320.1 | Thale cress | nucleus | 34.82 | 30.3 |
| AT5G29624.1 | Thale cress | cytosol | 28.43 | 30.12 |
| AT4G14980.1 | Thale cress | cytosol | 31.72 | 30.09 |
| AT5G37620.1 | Thale cress | cytosol | 37.91 | 30.06 |
| AT2G19650.1 | Thale cress | cytosol | 39.46 | 29.91 |
| AT2G04680.1 | Thale cress | cytosol | 37.91 | 29.83 |
| AT2G19660.2 | Thale cress | nucleus | 39.65 | 29.71 |
| AT3G27473.1 | Thale cress | cytosol | 37.91 | 29.61 |
| AT4G01350.1 | Thale cress | cytosol | 37.33 | 29.6 |
| AT3G46810.1 | Thale cress | cytosol | 39.27 | 29.59 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 30.95 | 29.57 |
| AT3G46800.1 | Thale cress | cytosol | 38.88 | 29.47 |
| AT4G13992.1 | Thale cress | mitochondrion | 36.17 | 29.13 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 36.56 | 28.81 |
| AT5G54050.1 | Thale cress | nucleus | 32.3 | 28.79 |
| AT4G11390.2 | Thale cress | cytosol | 30.37 | 28.75 |
| AT5G59940.1 | Thale cress | cytosol | 35.98 | 28.57 |
| AT3G28650.1 | Thale cress | cytosol | 36.36 | 28.27 |
| AT3G27490.1 | Thale cress | cytosol | 36.75 | 27.86 |
| AT3G45530.1 | Thale cress | cytosol | 37.14 | 27.75 |
| AT3G27500.1 | Thale cress | cytosol | 37.14 | 27.75 |
| AT5G42840.1 | Thale cress | cytosol | 35.98 | 27.72 |
| AT5G59920.1 | Thale cress | cytosol | 37.91 | 27.61 |
| AT5G54040.1 | Thale cress | cytosol | 31.53 | 27.35 |
| AT5G54020.2 | Thale cress | nucleus | 30.95 | 27.21 |
| AT4G02180.1 | Thale cress | cytosol | 49.13 | 25.68 |
| AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 29.21 | 25.55 |
| KRG95394 | Soybean | nucleus | 20.5 | 18.69 |
| KRH67075 | Soybean | nucleus | 20.12 | 18.25 |
Protein Annotations
| ArrayExpress:AT1G69150 | EnsemblPlants:AT1G69150.1 | EnsemblPlantsGene:AT1G69150 | EntrezGene:843246 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:DC1 | PFAM:PF03107 | ProteinID:AEE34888.1 | RefSeq:AT1G69150 | RefSeq:AT1G69150-TAIR-G |
| RefSeq:NP_177075.1 | SEG:seg | SUPFAM:SSF57889 | TAIR:AT1G69150 | TAIR:AT1G69150.1 | UniParc:UPI000016326B |
| UniProt:F4I0J7 | MapMan:35.2 | : | : | : | : |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4I0J7]
Coordinates
chr1:-:25993262..25995435
Molecular Weight (calculated)
59647.3 Da
IEP (calculated)
7.760
GRAVY (calculated)
-0.393
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGVTHVFH KTCANNTYNI AHPSQTCDNI LNHTYNFNIG GGRCAGCGEK IYDSLIYICN KCVLVPLRKG RFGSSYFHFN CAKYPPSEVI DVPQHHDHKL
101: KLEMVKSCFS CATCGKDSDG YSYKCHECDL KFHVNCEKHP AEVTHFSHPL HPLKLVKVEP PAYTDKKCRL CGEKLANSEV FYHCSACNFS LDLQCIFYPP
201: KQNPHDPNIH GHQLTLMPKS ISFSCTSCGL KGDRSPYVCL PCDFTSHNDC SGFPWVININ RHDHRVSRTS LIGVVNSVCG ICRKNMDWSC GGYSCKRCPT
301: SVFHTKCVTR EDVWDGKEMK DEPEEEEDIL PFKVIDENTI QHVSHKEHNL RLDKSGIFIE ERICEACVYP IYHHSFYSCM SCSFILHESC AYLPLWKRHV
401: VSNDRHKYKY WDYFIRCTAC GLFSNGFRYE AMRASLDLRC ASITEPFVHK SHPHPLFYTS PRGICIVCKK EAQHVLRCVE DDCEYIMDYK CALLPYEVKH
501: SVDQHSLFTL WRRRCRW
101: KLEMVKSCFS CATCGKDSDG YSYKCHECDL KFHVNCEKHP AEVTHFSHPL HPLKLVKVEP PAYTDKKCRL CGEKLANSEV FYHCSACNFS LDLQCIFYPP
201: KQNPHDPNIH GHQLTLMPKS ISFSCTSCGL KGDRSPYVCL PCDFTSHNDC SGFPWVININ RHDHRVSRTS LIGVVNSVCG ICRKNMDWSC GGYSCKRCPT
301: SVFHTKCVTR EDVWDGKEMK DEPEEEEDIL PFKVIDENTI QHVSHKEHNL RLDKSGIFIE ERICEACVYP IYHHSFYSCM SCSFILHESC AYLPLWKRHV
401: VSNDRHKYKY WDYFIRCTAC GLFSNGFRYE AMRASLDLRC ASITEPFVHK SHPHPLFYTS PRGICIVCKK EAQHVLRCVE DDCEYIMDYK CALLPYEVKH
501: SVDQHSLFTL WRRRCRW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.