Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040595.1-P | Field mustard | cytosol | 58.38 | 67.37 |
| CDY28703 | Canola | cytosol | 60.4 | 60.04 |
| CDY51540 | Canola | nucleus | 61.21 | 59.06 |
| AT4G14980.1 | Thale cress | cytosol | 63.43 | 57.61 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 60.81 | 55.64 |
| AT5G54040.1 | Thale cress | cytosol | 63.64 | 52.85 |
| AT5G54050.1 | Thale cress | nucleus | 61.82 | 52.76 |
| AT5G54030.1 | Thale cress | cytosol | 44.44 | 52.51 |
| AT5G54020.2 | Thale cress | nucleus | 61.01 | 51.36 |
| AT5G29624.1 | Thale cress | cytosol | 48.89 | 49.59 |
| AT5G45730.1 | Thale cress | nucleus | 50.3 | 44.46 |
| AT1G58037.1 | Thale cress | cytosol | 30.1 | 43.44 |
| AT3G06990.1 | Thale cress | nucleus | 47.07 | 43.23 |
| AT3G07000.1 | Thale cress | cytosol | 47.07 | 40.59 |
| AT3G27510.1 | Thale cress | cytosol | 35.35 | 39.77 |
| AT4G01925.1 | Thale cress | cytosol | 22.22 | 39.29 |
| AT2G43220.1 | Thale cress | peroxisome | 40.2 | 36.99 |
| AT4G11540.1 | Thale cress | cytosol | 38.38 | 36.19 |
| AT4G11390.2 | Thale cress | cytosol | 39.39 | 35.71 |
| AT5G40320.1 | Thale cress | nucleus | 42.63 | 35.52 |
| AT4G16015.1 | Thale cress | cytosol | 36.36 | 33.64 |
| AT4G01930.1 | Thale cress | cytosol | 42.83 | 32.52 |
| AT4G01910.1 | Thale cress | cytosol | 41.82 | 31.8 |
| AT4G01740.1 | Thale cress | cytosol | 41.82 | 31.75 |
| AT4G11550.1 | Thale cress | cytosol | 42.63 | 31.59 |
| AT4G01920.1 | Thale cress | cytosol | 41.82 | 31.46 |
| AT3G46800.1 | Thale cress | cytosol | 42.42 | 30.79 |
| AT5G22355.1 | Thale cress | cytosol | 40.81 | 30.42 |
| AT3G27473.1 | Thale cress | cytosol | 40.61 | 30.36 |
| AT4G01760.1 | Thale cress | cytosol | 40.81 | 30.28 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 36.77 | 30.13 |
| AT3G27500.1 | Thale cress | cytosol | 41.82 | 29.91 |
| AT3G45530.1 | Thale cress | cytosol | 41.82 | 29.91 |
| AT3G28650.1 | Thale cress | cytosol | 40.0 | 29.77 |
| AT4G02190.1 | Thale cress | cytosol | 39.6 | 29.74 |
| AT5G42840.1 | Thale cress | cytosol | 39.39 | 29.06 |
| AT3G27490.1 | Thale cress | cytosol | 40.0 | 29.03 |
| AT1G69150.1 | Thale cress | cytosol | 30.3 | 29.01 |
| AT1G65180.1 | Thale cress | nucleus | 37.98 | 28.79 |
| AT3G46810.1 | Thale cress | cytosol | 39.8 | 28.72 |
| AT3G48400.1 | Thale cress | cytosol | 35.76 | 28.59 |
| AT2G19660.2 | Thale cress | nucleus | 39.8 | 28.55 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 37.37 | 28.2 |
| AT3G43890.1 | Thale cress | cytosol | 37.37 | 27.99 |
| AT5G59940.1 | Thale cress | cytosol | 36.77 | 27.96 |
| AT2G04680.1 | Thale cress | cytosol | 36.77 | 27.7 |
| AT4G01350.1 | Thale cress | cytosol | 36.36 | 27.61 |
| AT2G19650.1 | Thale cress | cytosol | 37.98 | 27.57 |
| AT5G37620.1 | Thale cress | cytosol | 35.35 | 26.84 |
| AT4G13992.1 | Thale cress | mitochondrion | 34.75 | 26.79 |
| AT5G59920.1 | Thale cress | cytosol | 38.38 | 26.76 |
| AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 30.91 | 25.89 |
| KRG95394 | Soybean | nucleus | 24.85 | 21.69 |
| AT4G02180.1 | Thale cress | cytosol | 42.02 | 21.03 |
| KRH67075 | Soybean | nucleus | 24.04 | 20.88 |
Protein Annotations
| MapMan:35.2 | EntrezGene:814991 | ProteinID:AAT69171.1 | ProteinID:AEC05840.1 | ArrayExpress:AT2G04500 | EnsemblPlantsGene:AT2G04500 |
| RefSeq:AT2G04500 | TAIR:AT2G04500 | RefSeq:AT2G04500-TAIR-G | EnsemblPlants:AT2G04500.1 | TAIR:AT2G04500.1 | Unigene:At.41301 |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | InterPro:IPR000433 |
| RefSeq:NP_178530.2 | PFAM:PF03107 | PO:PO:0009005 | ScanProsite:PS01357 | PFscan:PS50135 | PANTHER:PTHR32410 |
| UniProt:Q6DR61 | SUPFAM:SSF57889 | UniParc:UPI000034EE57 | InterPro:Znf_ZZ | SEG:seg | : |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q6DR61]
Coordinates
chr2:+:1568279..1570271
Molecular Weight (calculated)
57028.9 Da
IEP (calculated)
6.118
GRAVY (calculated)
-0.291
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRDLRALPC SHFPKIFING NHDCHFCKID LSTTSLYARC TICNVNMDLD CMVNLPPLTI FEPKHHKHSF NLLLRVVTFT CNACGLEGDR NPYVCYECHL
101: MVHKDCIEGL PGVIYINRHD HRVSHTFHLG QEERDWECGV CRRTIDWVYG AYTCSLCPSY AVHSKCATRK EVWDGRELED VSEEDEEIED PFKVINETDI
201: IHFSHEEHVL RLDENCHMEN DATRCRGCIL AINGNLSYKC LECDFIIHKV CASLPRKRRH FLHNHKLTLR VDKASIFLCS TCDTTPNGFR YECDEDHGDE
301: EFVFDLQCSS ISEPFLHDLH PHPLYWTLEH SKKCKACGTK AGYDLNCIVC DDYSLCMTCA TLPSKVKHRC DDHLLSLRQG ASDFDTGHLW CDICETKTDP
401: SVFYYTCDDC GVSLHLKCVL GDLYNAKLGL IDPRDPAHEV LPNNGVTRPF CFHCELRCKF PFLIRRATEE FTLYYCSLNC CLEAAFYIPP VTDEG
101: MVHKDCIEGL PGVIYINRHD HRVSHTFHLG QEERDWECGV CRRTIDWVYG AYTCSLCPSY AVHSKCATRK EVWDGRELED VSEEDEEIED PFKVINETDI
201: IHFSHEEHVL RLDENCHMEN DATRCRGCIL AINGNLSYKC LECDFIIHKV CASLPRKRRH FLHNHKLTLR VDKASIFLCS TCDTTPNGFR YECDEDHGDE
301: EFVFDLQCSS ISEPFLHDLH PHPLYWTLEH SKKCKACGTK AGYDLNCIVC DDYSLCMTCA TLPSKVKHRC DDHLLSLRQG ASDFDTGHLW CDICETKTDP
401: SVFYYTCDDC GVSLHLKCVL GDLYNAKLGL IDPRDPAHEV LPNNGVTRPF CFHCELRCKF PFLIRRATEE FTLYYCSLNC CLEAAFYIPP VTDEG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.