Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51540 | Canola | nucleus | 91.84 | 76.8 |
| CDY28703 | Canola | cytosol | 87.18 | 75.1 |
| AT2G04500.1 | Thale cress | cytosol | 67.37 | 58.38 |
| AT4G14980.1 | Thale cress | cytosol | 73.19 | 57.61 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 68.07 | 53.97 |
| AT5G54050.1 | Thale cress | nucleus | 69.23 | 51.21 |
| AT5G54020.2 | Thale cress | nucleus | 69.0 | 50.34 |
| AT5G54040.1 | Thale cress | cytosol | 69.7 | 50.17 |
| AT5G54030.1 | Thale cress | cytosol | 48.95 | 50.12 |
| AT5G29624.1 | Thale cress | cytosol | 54.55 | 47.95 |
| Bra024127.1-P | Field mustard | nucleus | 39.63 | 41.56 |
| Bra025591.1-P | Field mustard | nucleus | 49.42 | 35.87 |
| Bra017007.1-P | Field mustard | nucleus | 43.36 | 31.9 |
| Bra040143.1-P | Field mustard | nucleus | 44.52 | 31.21 |
| Bra033522.1-P | Field mustard | cytosol | 34.5 | 30.14 |
| Bra020274.1-P | Field mustard | nucleus | 40.09 | 27.48 |
| Bra028463.1-P | Field mustard | cytosol | 33.8 | 27.05 |
| Bra025569.1-P | Field mustard | nucleus | 32.17 | 25.89 |
| Bra011134.1-P | Field mustard | mitochondrion | 38.23 | 23.67 |
| KRG95394 | Soybean | nucleus | 27.27 | 20.63 |
| KRH67075 | Soybean | nucleus | 26.81 | 20.18 |
| Bra001113.1-P | Field mustard | cytosol | 21.21 | 19.74 |
| Bra036288.1-P | Field mustard | cytosol, nucleus, plasma membrane | 47.32 | 12.13 |
Protein Annotations
| EnsemblPlants:Bra040595.1 | EnsemblPlants:Bra040595.1-P | EnsemblPlantsGene:Bra040595 | Gene3D:3.30.60.20 | InterPro:DC1 | PANTHER:PTHR32410 |
| PFAM:PF03107 | SEG:seg | SUPFAM:SSF57889 | UniParc:UPI0002547573 | UniProt:M4FHL7 | MapMan:35.2 |
Description
AT4G14980 (E=1e-184) | INVOLVED IN: intracellular signaling cascade; EXPRESSED IN: shoot apex, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein kinase C, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: DC1 domain-containing protein (TAIR:AT5G54050.1); Has 1104 Blast hits to 501 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 8; Plants - 1051; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Coordinates
chrA05:+:23574538..23575827
Molecular Weight (calculated)
49129.7 Da
IEP (calculated)
6.484
GRAVY (calculated)
-0.343
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIDCLKNPP PLTVFQPKHH DHSLTLLSRL VTFTCNACGL EGDRNPYVCL QCNMMLHKDC IDLPRVISIN RHDHRISHTF HLGQGQEDWE CGVCRKKIDW
101: VYGAFKCSRC PSYAVHSKCA TRSEVWDGIE LEDVPDEEEE IEDPYKVVNE KDIIHFSHEN HILRLDESCV TDKRCEGCVL PFNGDPCYRC VECDFILHKT
201: CASLPRKKRH LLHNHKLTLL VDEVTFQCRA CKINSNGFRY KCEEGCKDKF VFDVRCSSVS EPFRHDLHSH PLYWTLEGSK ECRACDTETK NPLCCTVCDD
301: YALCMKCTTL PRKVKHRCDD HLLSLRQGVG NASGDLWCDV CESKVIASEC YYTCQECGVS LDIDCVLGDF YYLKVGHIGP GLEVLANNGV TRPLCSGCEV
401: RCKFPFLARD TTTQEPVCYF CNINCLHYH
101: VYGAFKCSRC PSYAVHSKCA TRSEVWDGIE LEDVPDEEEE IEDPYKVVNE KDIIHFSHEN HILRLDESCV TDKRCEGCVL PFNGDPCYRC VECDFILHKT
201: CASLPRKKRH LLHNHKLTLL VDEVTFQCRA CKINSNGFRY KCEEGCKDKF VFDVRCSSVS EPFRHDLHSH PLYWTLEGSK ECRACDTETK NPLCCTVCDD
301: YALCMKCTTL PRKVKHRCDD HLLSLRQGVG NASGDLWCDV CESKVIASEC YYTCQECGVS LDIDCVLGDF YYLKVGHIGP GLEVLANNGV TRPLCSGCEV
401: RCKFPFLARD TTTQEPVCYF CNINCLHYH
001: MLSTESEIET RPNLLVPLHE HPLSCTEEFI YSCDFCNSRN GIAYQCTECG YRLHKDCIQG FLSYPSPCGH SLKISMPNKS PQYANDRCHF CLCKLKTPFA
101: RCTVCNINIS PLCMVKQPPL TICNPKHHKH SLTLLVRLVI FTCNACGVEG DRNPYVCLQC NLMVHKDCIE NLPRVICINR HDHRIFHTFH LGQREEHWEC
201: GVCRKTVDWV YGAFKCSRCP NYAVHSRCAT KKEVWDGIEL EDVPEEEEEV EEPFVVINEK EIIHFSHEEH VLRLDENYVT DNVNMRCRGC VLAINGDSCY
301: KCVECDYILH KACASLPRKK RHLLHNHKLT LQVDEAASSD FVCTACRTYS NGFRYKCFEG CEDDVVYDVR CSSVSEPFQH DLHPHPLYWT LESSKRCQAC
401: GTETDDNLLN CTVCDDYALC MKCATLPRKV KHRCDDHFLS LCQGVGNASG NLWCDICETK TDPNVCYYTC EECGLSLHLN CVLGDFYYVK VIPDQPKVFA
501: NNGVTRLFCG VCEVRCKFPF IMWGAVGDFT GYVCSINCVF PKADK
101: RCTVCNINIS PLCMVKQPPL TICNPKHHKH SLTLLVRLVI FTCNACGVEG DRNPYVCLQC NLMVHKDCIE NLPRVICINR HDHRIFHTFH LGQREEHWEC
201: GVCRKTVDWV YGAFKCSRCP NYAVHSRCAT KKEVWDGIEL EDVPEEEEEV EEPFVVINEK EIIHFSHEEH VLRLDENYVT DNVNMRCRGC VLAINGDSCY
301: KCVECDYILH KACASLPRKK RHLLHNHKLT LQVDEAASSD FVCTACRTYS NGFRYKCFEG CEDDVVYDVR CSSVSEPFQH DLHPHPLYWT LESSKRCQAC
401: GTETDDNLLN CTVCDDYALC MKCATLPRKV KHRCDDHFLS LCQGVGNASG NLWCDICETK TDPNVCYYTC EECGLSLHLN CVLGDFYYVK VIPDQPKVFA
501: NNGVTRLFCG VCEVRCKFPF IMWGAVGDFT GYVCSINCVF PKADK
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JIJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.