Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21132 | Canola | cytosol | 99.18 | 99.18 |
| AT2G43220.1 | Thale cress | peroxisome | 45.59 | 51.86 |
| Bra040595.1-P | Field mustard | cytosol | 31.21 | 44.52 |
| Bra024127.1-P | Field mustard | nucleus | 27.45 | 41.08 |
| Bra025591.1-P | Field mustard | nucleus | 33.82 | 35.03 |
| Bra017007.1-P | Field mustard | nucleus | 33.17 | 34.82 |
| Bra028463.1-P | Field mustard | cytosol | 29.25 | 33.4 |
| Bra033522.1-P | Field mustard | cytosol | 25.82 | 32.18 |
| Bra020274.1-P | Field mustard | nucleus | 30.88 | 30.19 |
| Bra011134.1-P | Field mustard | mitochondrion | 33.99 | 30.01 |
| Bra025569.1-P | Field mustard | nucleus | 22.55 | 25.89 |
| Bra001113.1-P | Field mustard | cytosol | 18.3 | 24.3 |
| KRG95394 | Soybean | nucleus | 20.1 | 21.69 |
| KRH67075 | Soybean | nucleus | 19.12 | 20.53 |
| Bra036288.1-P | Field mustard | cytosol, nucleus, plasma membrane | 36.27 | 13.27 |
Protein Annotations
| MapMan:35.2 | EnsemblPlantsGene:Bra040143 | EnsemblPlants:Bra040143.1 | EnsemblPlants:Bra040143.1-P | InterPro:DC1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | GO:GO:0046872 | InterPro:IPR002219 | UniProt:M4FGB5 |
| InterPro:PE/DAG-bd | PFAM:PF03107 | PFscan:PS50081 | PANTHER:PTHR32410 | SMART:SM00109 | SMART:SM00249 |
| SUPFAM:SSF57889 | UniParc:UPI000254507D | InterPro:Znf_PHD | : | : | : |
Description
AT2G43220 (E=5e-153) | DC1 domain-containing protein
Coordinates
chrA01:+:28467739..28469577
Molecular Weight (calculated)
70660.9 Da
IEP (calculated)
6.652
GRAVY (calculated)
-0.400
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTHFWSPDH RDEVPFDDRW EIAFTAKSVI KNLNRSPSNF CGDCLEHIED NDFRWRCSLC IKKWHLRCVP SSPDDINHPF HPYHPLELLI DVPRPPDHSK
101: SKCDECQQEL KSYFYHCSLC DFSMHVRCSK EPPPPIVETA KCHEHTLTCM VRNDTFTCNA CGTHGERCPY VCAPCGVMFH WECIKLPHVI NINRHNHRVS
201: HTFSLGFGKR KCMICHKKVD WRYGAYSCST CPDDYVVHSK CATRSDVWDG VELEGVPEEY FDVLPFEVIE EGISIKHFSH EEHILYTVED EDDMTDGSMR
301: CEACVHPIFS EAHYKCMECH FIIHETCANL PLRKRHWLST TPFYLNANDN DTSDSFFRCG ACQTISNGFR YESDKGVSLD MRCAFVISSY SDHECHPHTL
401: FITTLDEGNC GGCKLTKKHV LRCTECDFSL CLACATLPKK IKRKGDEHFL FLRHGEKEVS GKYWCEVCEA VLDPHEEWFY TCHVSGVTFH IKCVVGEFPN
501: AKPGFTYRYQ CVLGHNLTLY GARVCTRHHG EEIIQLVRND RSTRPKCASC GSRCLPPLIL KFYLVDTYEV YCCNLECSLK FLLDSAQDFN QYFQNWTRPA
601: GRTGPTITPL VG
101: SKCDECQQEL KSYFYHCSLC DFSMHVRCSK EPPPPIVETA KCHEHTLTCM VRNDTFTCNA CGTHGERCPY VCAPCGVMFH WECIKLPHVI NINRHNHRVS
201: HTFSLGFGKR KCMICHKKVD WRYGAYSCST CPDDYVVHSK CATRSDVWDG VELEGVPEEY FDVLPFEVIE EGISIKHFSH EEHILYTVED EDDMTDGSMR
301: CEACVHPIFS EAHYKCMECH FIIHETCANL PLRKRHWLST TPFYLNANDN DTSDSFFRCG ACQTISNGFR YESDKGVSLD MRCAFVISSY SDHECHPHTL
401: FITTLDEGNC GGCKLTKKHV LRCTECDFSL CLACATLPKK IKRKGDEHFL FLRHGEKEVS GKYWCEVCEA VLDPHEEWFY TCHVSGVTFH IKCVVGEFPN
501: AKPGFTYRYQ CVLGHNLTLY GARVCTRHHG EEIIQLVRND RSTRPKCASC GSRCLPPLIL KFYLVDTYEV YCCNLECSLK FLLDSAQDFN QYFQNWTRPA
601: GRTGPTITPL VG
001: MAKTLDLFWH EHPLYEKYRM FTCQECHRSA IPFFEVFYGC FRCNIKWHPY CVPRSTKNIN HPCHPNHPLE VLLQGPPSYS DEKCSLCQRK LSNFVYHCKL
101: CNFSIDMECG NRPPPHKVDH PKCHEHALTL MGREVSFTCN ACGTHGERNP YVCLPCSVMF HYDCIDLPHV ININRHDHRI SHSYPLKRGN WVCEICRQDI
201: NTTYGGYSCN KCPDFFVHSK CATRKDVWDG TELEGIPEEV VDVAPFEVIE EGVIYHFSHE KHNLFLIEDV FIDGAEDMHC EACARPVSSE KHYKCVECKF
301: ILHEECANLP LTKRHGLSTG IFYLRFGKDF SEQNFSCDAC NRDGRGFSYK DEEGVVLDVL CASLSFFKHP KLHPHTLFLT TIDRGTCLAC GENKLNVLRC
401: VDCDYSLDYK CATLPLVIKH RCDTHYLVLR SGEEAPEGKY WCEICEAETN PERWFYTCDD CGVVCHIECV TGDFLNIKPG IIMKNRENKF EVGFNDHDSR
501: PKCTDCGSRC RFPRFFKVTR KNIEYYYCSK ACFQNAKF
101: CNFSIDMECG NRPPPHKVDH PKCHEHALTL MGREVSFTCN ACGTHGERNP YVCLPCSVMF HYDCIDLPHV ININRHDHRI SHSYPLKRGN WVCEICRQDI
201: NTTYGGYSCN KCPDFFVHSK CATRKDVWDG TELEGIPEEV VDVAPFEVIE EGVIYHFSHE KHNLFLIEDV FIDGAEDMHC EACARPVSSE KHYKCVECKF
301: ILHEECANLP LTKRHGLSTG IFYLRFGKDF SEQNFSCDAC NRDGRGFSYK DEEGVVLDVL CASLSFFKHP KLHPHTLFLT TIDRGTCLAC GENKLNVLRC
401: VDCDYSLDYK CATLPLVIKH RCDTHYLVLR SGEEAPEGKY WCEICEAETN PERWFYTCDD CGVVCHIECV TGDFLNIKPG IIMKNRENKF EVGFNDHDSR
501: PKCTDCGSRC RFPRFFKVTR KNIEYYYCSK ACFQNAKF
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW73]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.