CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040143.1-P	Field mustard	nucleus	99.18	99.18
CDY29992	Canola	cytosol	33.5	78.24
CDY29993	Canola	cytosol	70.26	69.69
AT2G43220.1	Thale cress	peroxisome	45.59	51.86
CDX97701	Canola	cytosol	16.5	47.64
CDY63456	Canola	cytosol	27.45	42.53
CDY30196	Canola	cytosol	27.29	40.83
CDY51540	Canola	nucleus	33.99	40.55
CDY60784	Canola	cytosol	22.22	40.48
CDY28703	Canola	cytosol	32.84	40.36
CDY06776	Canola	cytosol	18.63	40.0
CDY21921	Canola	plastid	23.69	38.16
CDY63290	Canola	cytosol	31.05	37.85
CDY41709	Canola	peroxisome	32.35	37.64
CDY52787	Canola	nucleus	37.25	36.13
CDY58516	Canola	nucleus	29.25	35.66
CDX93183	Canola	cytosol	38.07	34.98
CDY46706	Canola	mitochondrion	30.07	34.52
CDY22036	Canola	cytosol	33.5	34.4
CDY69979	Canola	nucleus	35.62	34.22
CDY36839	Canola	cytosol	33.82	34.21
CDY48718	Canola	cytosol	20.59	33.96
CDY52927	Canola	cytosol	20.91	33.95
CDY65338	Canola	cytosol	37.09	33.88
CDY44167	Canola	cytosol	26.96	33.54
CDX74183	Canola	cytosol	18.79	33.43
CDY27940	Canola	cytosol	30.72	33.33
CDY52789	Canola	cytosol	21.73	32.76
CDY22034	Canola	endoplasmic reticulum	32.68	31.8
CDX67463	Canola	cytosol	23.86	31.47
CDY64703	Canola	cytosol	33.82	31.17
CDY22883	Canola	cytosol	33.01	30.93
CDY27938	Canola	cytosol	22.06	30.75
CDY63460	Canola	cytosol, mitochondrion	20.1	29.57
CDY43524	Canola	cytosol	24.35	29.45
CDY30007	Canola	cytosol, nucleus, plastid	31.7	29.17
CDY44574	Canola	cytosol	22.88	29.05
CDX88733	Canola	cytosol	29.41	28.85
CDX71062	Canola	cytosol	29.09	28.43
CDY09238	Canola	cytosol	21.73	28.0
CDY09240	Canola	cytosol	21.73	28.0
CDX74184	Canola	plasma membrane	18.63	27.8
CDY36353	Canola	plastid	14.05	27.56
CDY40661	Canola	cytosol	34.15	27.43
CDY50383	Canola	cytosol	36.27	26.33
CDY22052	Canola	nucleus	26.63	25.75
CDY22035	Canola	cytosol	36.27	25.06
CDY42579	Canola	nucleus	10.78	24.09
CDX82703	Canola	cytosol	34.97	22.18
KRG95394	Soybean	nucleus	20.1	21.69
CDY50382	Canola	cytosol	34.8	21.47
KRH67075	Soybean	nucleus	19.12	20.53

Protein Annotations

MapMan:35.2	GO:A0A078G7Y5	UniProt:A0A078G7Y5	EnsemblPlants:CDY21132	ProteinID:CDY21132	ProteinID:CDY21132.1
InterPro:DC1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0035556
GO:GO:0046872	GO:GO:0047134	EnsemblPlantsGene:GSBRNA2T00015318001	InterPro:IPR002219	InterPro:PE/DAG-bd	PFAM:PF03107
PFscan:PS50081	PANTHER:PTHR32410	SMART:SM00109	SMART:SM00249	SUPFAM:SSF57889	UniParc:UPI0004EE4385
InterPro:Znf_PHD	:	:	:	:	:

Description

BnaA01g33630DBnaA01g33630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7Y5]

Coordinates

chrLK032116:+:169089..170927

Molecular Weight (calculated)

70584.7 Da

IEP (calculated)

6.570

GRAVY (calculated)

-0.380

Length

612 amino acids

Sequence
(BLAST)

001: MDTHFWSPDH RDEVPFDDRW EIAFTAKSAI KNLNRSPFNF CGDCLEHIED NDFPWCCSLC IKKWHLRCVP SSPDDINHPF HPYHPLELLI DVPRPPDHSK
101: SKCDECQQEL KSYFYHCSLC DFSMHVRCSK EPPPPIVETA KCHEHTLTCM VRNDTFTCNA CGTHGERCPY VCAPCGVMFH WECIKLPHVI NINRHNHRVS
201: HTFSLGFGKR KCMICHKKVD WRYGAYSCST CPDDYVVHSK CATRSDVWDG VELEGVPEEY FDVLPFEVIE EGISIKHFSH EEHILYTVED EDDMTDGSMR
301: CEACVHPIFS EAHYKCMECH FIIHETCANL PLRKRHWLST TPFYLNANDN DTSDSFFRCG ACQTISNGFR YESDKGVSLD MRCAFVISSY SDHECHPHTL
401: FITTLDEGNC GGCKLTKKHV LRCTECDFSL CLACATLPKK IKRKGDEHFL FLRHGEKEVS GKYWCEVCEA VLDPHEEWFY TCHVSGVTFH IKCVVGEFPN
501: AKPGFTYRYQ CVLGHNLTLY GARVCTRHHG EEIIQLVRND RSTRPKCASC GSRCLTPLIL KFYLVDTYEV YCCNLECSLK FLLDSAQDFN QYFQNWTRPA
601: GRTGPTITPL VG

Best Arabidopsis Sequence Match ( AT2G43220.1 )
(BLAST)

001: MAKTLDLFWH EHPLYEKYRM FTCQECHRSA IPFFEVFYGC FRCNIKWHPY CVPRSTKNIN HPCHPNHPLE VLLQGPPSYS DEKCSLCQRK LSNFVYHCKL
101: CNFSIDMECG NRPPPHKVDH PKCHEHALTL MGREVSFTCN ACGTHGERNP YVCLPCSVMF HYDCIDLPHV ININRHDHRI SHSYPLKRGN WVCEICRQDI
201: NTTYGGYSCN KCPDFFVHSK CATRKDVWDG TELEGIPEEV VDVAPFEVIE EGVIYHFSHE KHNLFLIEDV FIDGAEDMHC EACARPVSSE KHYKCVECKF
301: ILHEECANLP LTKRHGLSTG IFYLRFGKDF SEQNFSCDAC NRDGRGFSYK DEEGVVLDVL CASLSFFKHP KLHPHTLFLT TIDRGTCLAC GENKLNVLRC
401: VDCDYSLDYK CATLPLVIKH RCDTHYLVLR SGEEAPEGKY WCEICEAETN PERWFYTCDD CGVVCHIECV TGDFLNIKPG IIMKNRENKF EVGFNDHDSR
501: PKCTDCGSRC RFPRFFKVTR KNIEYYYCSK ACFQNAKF

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW73]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.