CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06776	Canola	cytosol	40.91	72.63
Bra011134.1-P	Field mustard	mitochondrion	94.66	69.12
CDY63460	Canola	cytosol, mitochondrion	52.96	64.42
CDY63456	Canola	cytosol	44.27	56.71
CDY46706	Canola	mitochondrion	49.41	46.9
CDY30196	Canola	cytosol	33.6	41.56
CDY29992	Canola	cytosol	20.55	39.69
CDX97701	Canola	cytosol	16.01	38.21
CDY52789	Canola	cytosol	26.09	32.51
CDY42579	Canola	nucleus	16.8	31.02
CDY41709	Canola	peroxisome	31.23	30.04
CDY52927	Canola	cytosol	21.74	29.18
CDX74184	Canola	plasma membrane	23.52	29.02
CDY48718	Canola	cytosol	21.15	28.84
CDX67463	Canola	cytosol	26.09	28.45
CDY36839	Canola	cytosol	33.99	28.43
CDY22034	Canola	endoplasmic reticulum	34.78	27.98
CDX88733	Canola	cytosol	33.6	27.24
CDY52787	Canola	nucleus	33.79	27.1
CDX74183	Canola	cytosol	18.38	27.03
CDY51540	Canola	nucleus	27.08	26.71
CDY69979	Canola	nucleus	33.6	26.69
CDX93183	Canola	cytosol	34.98	26.58
CDY22036	Canola	cytosol	31.23	26.51
CDY27940	Canola	cytosol	29.45	26.42
CDY64703	Canola	cytosol	34.39	26.2
CDX71062	Canola	cytosol	32.41	26.2
CDY65338	Canola	cytosol	34.59	26.12
CDY21921	Canola	plastid	19.57	26.05
CDY28703	Canola	cytosol	25.49	25.9
CDY58516	Canola	nucleus	25.49	25.7
CDY63290	Canola	cytosol	25.3	25.5
CDY29993	Canola	cytosol	30.24	24.8
CDY27938	Canola	cytosol	21.34	24.6
CDY22883	Canola	cytosol	31.62	24.5
CDY30007	Canola	cytosol, nucleus, plastid	32.02	24.36
CDY21132	Canola	cytosol	29.45	24.35
CDY44574	Canola	cytosol	21.74	22.82
CDY09238	Canola	cytosol	21.15	22.53
CDY09240	Canola	cytosol	21.15	22.53
CDY40661	Canola	cytosol	33.79	22.44
CDY22052	Canola	nucleus	27.47	21.96
CDY50383	Canola	cytosol	34.98	21.0
CDY44167	Canola	cytosol	20.36	20.93
CDY22035	Canola	cytosol	34.98	19.98
CDY60784	Canola	cytosol	12.65	19.05
CDY50382	Canola	cytosol	36.36	18.55
CDX82703	Canola	cytosol	34.98	18.34
CDY36353	Canola	plastid	10.67	17.31
KRG95394	Soybean	nucleus	17.39	15.52
KRH67075	Soybean	nucleus	17.39	15.44

Protein Annotations

MapMan:35.2	GO:A0A078I1R1	UniProt:A0A078I1R1	EnsemblPlants:CDY43524	ProteinID:CDY43524	ProteinID:CDY43524.1
InterPro:DC1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538
GO:GO:0034998	GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00076808001	InterPro:IPR002219	InterPro:PE/DAG-bd	PFAM:PF03107
PFAM:PF05251	PFscan:PS50081	PANTHER:PTHR32410	SUPFAM:SSF57889	InterPro:TMEM258/Ost5	TMHMM:TMhelix
UniParc:UPI0004EF47A0	SEG:seg	:	:	:	:

Description

BnaA01g07200DBnaA01g07200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1R1]

Coordinates

chrLK032560:-:105286..111783

Molecular Weight (calculated)

57988.0 Da

IEP (calculated)

7.685

GRAVY (calculated)

-0.120

Length

506 amino acids

Sequence
(BLAST)

001: MIRIKLPTHK HPLYPTPWVS RCNGCPRGGG YVKDGYRCYE CDFSFHKECA EATLEIHHPS HPAHPLSLVW EWRGPKSWGT RDMYYYRCSL CSLNFEIRCS
101: MLALEIDYPY HPQHPLKILT KEEHHFSDGK CLICGEELGL KVYHCSICKF TVDVGCVRDP PPLTILFPKA HEHQLNLTPR KISFDCDACG MAGDRSPYSC
201: QQCYFMIHQS CIDLPEIINV NRHEHRLSRR LHLSPGNWEC GFCHKNVDWS YGAYSCSICP NYVIHSQCAI QKNIWDKLEL KGIPEESHLE PFKVSSIPTF
301: NTSVLMWRGY RSFSCDDCSF GLHGRCAALP KTIQHWYDEH LIFLCYNKNK RGGEYWCDIC EEQIDTMIWF YTCDSCCVTF HTECVLGDFS RFMPGRIVTY
401: RKWRIKAMQT SPAPLIEAKH ITERSLYLSK MAASPIASPI AVAMYPTLSV FTLAIGLVIT AFFFIYEATS SRKNRSLGIE LATAALASVF LGFGSLFLLL
501: ASGVYV

Best Arabidopsis Sequence Match ( AT2G19660.1 )
(BLAST)

001: MEKVEVPPIH NHPLLPFTRF SYKACKGCGY VGYIYGGYHC NELGCESVFH KECADPLPEI NHYSHPDHPL KLLINVEPLA SCSQCPSSFE NGYLCSICDF
101: KLDFRCATRL PLEFILEEST VHEHPIQLSD GTRDGFVQLC KTCKWGVFDA VHYKCNKCDL RFHVECTKLF PQASHVLHPQ HPLKLLRCEE APDYADNKCL
201: LCGNKFDGRI HHCDVCNFTI CGGCMENPPP LSVVSPTTHE HQLYLLSKPL GFTCNACGTQ ADQSPYFCLQ CNFMIHWECI DLPRVININR HDHRISYTRR
301: LGHGQNTCGV CRKKVDGFYG GYSCSKCSNY VVHSRCATDE DVWDMIELEG TPEEPEEDAP FEVIDDNTIK HFSHDHNLVI NKDGRILHES TLCKACVFQI
401: CSDAFYSCEN CDFILHQKCA NLPRKKRHVC DNLPFTLVTN DTSDETSCDL CWQSFTGFRY ECLTRMVTLD VRCGSIREPL VHQSHQHPLY FSKRSSKSCT
501: ECGKNMDLDI GSFSCDECDY SLDFKCALLP QKVKWHRYDD HPLYLSCGES SVDGEYWCEA CETKVNSKKW FYTCNDCGVI LHISCVVGDF SYYMPGSKIG
601: WEEDLVVSNT SMCRPFCYVC NSQCKLPSIV KVVSKADVVL YICSLNCYYN FNRSNNYSSS DW

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:TAIR;Acc:AT2G19660]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.