Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40661 | Canola | cytosol | 94.02 | 61.94 |
| CDX74183 | Canola | cytosol | 35.86 | 52.33 |
| CDY64703 | Canola | cytosol | 54.98 | 41.57 |
| CDX97701 | Canola | cytosol | 17.53 | 41.51 |
| CDY41709 | Canola | peroxisome | 42.83 | 40.87 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 53.19 | 40.15 |
| AT5G59940.1 | Thale cress | cytosol | 50.6 | 39.02 |
| AT4G01350.1 | Thale cress | cytosol | 50.6 | 38.96 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 50.4 | 38.57 |
| CDY63456 | Canola | cytosol | 30.28 | 38.48 |
| CDY30196 | Canola | cytosol | 30.68 | 37.65 |
| AT5G59920.1 | Thale cress | cytosol | 52.39 | 37.04 |
| CDY09238 | Canola | cytosol | 34.26 | 36.21 |
| CDY09240 | Canola | cytosol | 34.06 | 36.0 |
| CDY28703 | Canola | cytosol | 35.66 | 35.94 |
| CDY51540 | Canola | nucleus | 36.45 | 35.67 |
| CDY60784 | Canola | cytosol | 23.51 | 35.12 |
| CDY58516 | Canola | nucleus | 32.87 | 32.87 |
| CDY21921 | Canola | plastid | 24.5 | 32.37 |
| CDX74184 | Canola | plasma membrane | 26.1 | 31.95 |
| CDX71062 | Canola | cytosol | 39.84 | 31.95 |
| CDX88733 | Canola | cytosol | 39.64 | 31.89 |
| CDY22036 | Canola | cytosol | 37.85 | 31.88 |
| CDY36839 | Canola | cytosol | 37.85 | 31.41 |
| CDY46706 | Canola | mitochondrion | 33.27 | 31.33 |
| CDY21132 | Canola | cytosol | 37.85 | 31.05 |
| CDX93183 | Canola | cytosol | 41.04 | 30.93 |
| CDY06776 | Canola | cytosol | 17.53 | 30.88 |
| CDY29993 | Canola | cytosol | 37.45 | 30.47 |
| CDY52787 | Canola | nucleus | 38.05 | 30.27 |
| CDY69979 | Canola | nucleus | 37.85 | 29.83 |
| CDY29992 | Canola | cytosol | 15.54 | 29.77 |
| CDY27940 | Canola | cytosol | 33.27 | 29.61 |
| CDY44167 | Canola | cytosol | 28.69 | 29.27 |
| CDY52927 | Canola | cytosol | 21.91 | 29.18 |
| CDY48718 | Canola | cytosol | 21.51 | 29.11 |
| CDY44574 | Canola | cytosol | 27.69 | 28.84 |
| CDX67463 | Canola | cytosol | 26.49 | 28.66 |
| CDY65338 | Canola | cytosol | 38.05 | 28.51 |
| CDY27938 | Canola | cytosol | 23.9 | 27.33 |
| CDY36353 | Canola | plastid | 16.93 | 27.24 |
| CDY22883 | Canola | cytosol | 35.06 | 26.95 |
| CDY22034 | Canola | endoplasmic reticulum | 31.87 | 25.44 |
| CDY52789 | Canola | cytosol | 20.52 | 25.37 |
| CDY43524 | Canola | cytosol | 25.5 | 25.3 |
| CDY42579 | Canola | nucleus | 12.55 | 22.99 |
| CDY63460 | Canola | cytosol, mitochondrion | 18.73 | 22.6 |
| CDY50383 | Canola | cytosol | 37.65 | 22.42 |
| CDY22035 | Canola | cytosol | 38.65 | 21.9 |
| KRG95394 | Soybean | nucleus | 23.51 | 20.81 |
| KRH67075 | Soybean | nucleus | 22.91 | 20.18 |
| CDY22052 | Canola | nucleus | 24.9 | 19.75 |
| CDX82703 | Canola | cytosol | 36.85 | 19.17 |
| CDY50382 | Canola | cytosol | 35.86 | 18.15 |
Protein Annotations
| EnsemblPlants:CDY63290 | EnsemblPlantsGene:GSBRNA2T00039145001 | GO:A0A078JDY9 | InterPro:DC1 | PANTHER:PTHR32410 | PFAM:PF03107 |
| ProteinID:CDY63290 | ProteinID:CDY63290.1 | SEG:seg | SUPFAM:SSF57889 | UniParc:UPI0004EE6CAB | UniProt:A0A078JDY9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g73210DBnaC03g73210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDY9]
Coordinates
chrLK034276:+:8084..10086
Molecular Weight (calculated)
56984.6 Da
IEP (calculated)
7.652
GRAVY (calculated)
-0.064
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHPCHPSHP LQVAEESKKS CYFCAAQPKV LYHCSICNFS VCFGCTKHPP PLVVEDPKTH KHPLSLFASQ ISFTCNRCGT ERNDPKPYIC VKCNFVVHGN
101: CIGFPRVINI NRHDHRISFT YHHRRRGTHC GVCVENVTQY YGAYVCSVCP DYTVHSRCAV YLYVWNGVDL EGTPERSEDI APFKVVGHNL IRHFSHSKHT
201: LRLDIVNIHD VYECIRCDAC VSPVGFGPPI YACGDSGCLF LLHEKCANFP IKKRLVFRTA PYMLECGDDA AIYCQMCGML CDGFKYTSQG VTPRHCVDVH
301: CSSLPEPFVH NLHSHPLLNY RITNIVCRAC ERLSNDNVLG CYACNFSLCL YCATLPENIL HMSSDDEHPL TLYYGEMSNG TSWCGVCESE LDPSNWLYTC
401: SECGVALHVQ CAFGDFSRLK PGRIYNCAER DYKVVLNSGN TRPFCSHCHS RCKVPFILRD KSKDNGYICS LSCLSIGLGI RQCIHLFTFM FFKFFFLQVV
501: WV
101: CIGFPRVINI NRHDHRISFT YHHRRRGTHC GVCVENVTQY YGAYVCSVCP DYTVHSRCAV YLYVWNGVDL EGTPERSEDI APFKVVGHNL IRHFSHSKHT
201: LRLDIVNIHD VYECIRCDAC VSPVGFGPPI YACGDSGCLF LLHEKCANFP IKKRLVFRTA PYMLECGDDA AIYCQMCGML CDGFKYTSQG VTPRHCVDVH
301: CSSLPEPFVH NLHSHPLLNY RITNIVCRAC ERLSNDNVLG CYACNFSLCL YCATLPENIL HMSSDDEHPL TLYYGEMSNG TSWCGVCESE LDPSNWLYTC
401: SECGVALHVQ CAFGDFSRLK PGRIYNCAER DYKVVLNSGN TRPFCSHCHS RCKVPFILRD KSKDNGYICS LSCLSIGLGI RQCIHLFTFM FFKFFFLQVV
501: WV
001: MATTAVNLPI HEHPLYPSAR CIIGECDGCH VNGYMYNGYF CNEPFCFIWF HKECAEAPAE ISHSSHHQHP LLLTNDSIDG PCDLCGQKLL PPCYSCSTCE
101: FKVDLTCAMK PSPPAIEHPL CHHHSLVFLK KREEKVSCEL CKDSIAGPSY SCLECDVYFH VNCIQLSKEV NHPCHSAHPL KLIPFESLTD DAETTCLLCG
201: KKPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHIKTHKHP LILFPRRIPC ICDICGKKCE FAVYVCPQCD FVTARGCIDL ARVININRHD HRIYLTHHLG
301: TGYSKCGVCH ENVNQYKGAY SCSVCPHYAV HSTCAVRTDV WDGVELEGTT EITEDNSPFK VVGDNLICHF SHEEHPLRFQ KDDVFIHDEH KRCAACIHPL
401: GFGSIYCCET CPFILHEKCA NLPMKKRLVF GTRPYTLMKE TTQLTDCTLC GIFSDGFAYS SRWLDVDVHC GSLNEPLVHD CHIHPLNFDK MEGHFCDGCK
501: KNIDDYMLRC KACDFDLCLY CATLPKKIWH RNDGHPLTLC CEEKEEASDK YWCDICEKEL DPSIWFYTCF DCGVTLHAQC VLGDFSRLVL GQNYWFGEKV
601: KFGAVPNNRN TRPLCIQCQS RCKVSVILKE RNEYNRYICS RSCLLSYLGE KI
101: FKVDLTCAMK PSPPAIEHPL CHHHSLVFLK KREEKVSCEL CKDSIAGPSY SCLECDVYFH VNCIQLSKEV NHPCHSAHPL KLIPFESLTD DAETTCLLCG
201: KKPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHIKTHKHP LILFPRRIPC ICDICGKKCE FAVYVCPQCD FVTARGCIDL ARVININRHD HRIYLTHHLG
301: TGYSKCGVCH ENVNQYKGAY SCSVCPHYAV HSTCAVRTDV WDGVELEGTT EITEDNSPFK VVGDNLICHF SHEEHPLRFQ KDDVFIHDEH KRCAACIHPL
401: GFGSIYCCET CPFILHEKCA NLPMKKRLVF GTRPYTLMKE TTQLTDCTLC GIFSDGFAYS SRWLDVDVHC GSLNEPLVHD CHIHPLNFDK MEGHFCDGCK
501: KNIDDYMLRC KACDFDLCLY CATLPKKIWH RNDGHPLTLC CEEKEEASDK YWCDICEKEL DPSIWFYTCF DCGVTLHAQC VLGDFSRLVL GQNYWFGEKV
601: KFGAVPNNRN TRPLCIQCQS RCKVSVILKE RNEYNRYICS RSCLLSYLGE KI
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JI14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.