Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033522.1-P | Field mustard | cytosol | 73.17 | 73.32 |
| CDY22883 | Canola | cytosol | 95.73 | 72.13 |
| CDY60784 | Canola | cytosol | 34.96 | 51.19 |
| CDY63456 | Canola | cytosol | 25.61 | 31.9 |
| CDY30196 | Canola | cytosol | 26.42 | 31.78 |
| CDY28703 | Canola | cytosol | 30.08 | 29.72 |
| CDY51540 | Canola | nucleus | 30.49 | 29.24 |
| CDY41709 | Canola | peroxisome | 31.1 | 29.09 |
| CDY58516 | Canola | nucleus | 29.67 | 29.08 |
| CDY52787 | Canola | nucleus | 36.99 | 28.84 |
| CDY63290 | Canola | cytosol | 29.27 | 28.69 |
| CDY65338 | Canola | cytosol | 38.62 | 28.36 |
| CDY44574 | Canola | cytosol | 27.44 | 28.01 |
| CDY22036 | Canola | cytosol | 33.74 | 27.85 |
| CDX93183 | Canola | cytosol | 37.2 | 27.48 |
| CDY69979 | Canola | nucleus | 35.37 | 27.32 |
| CDY21132 | Canola | cytosol | 33.54 | 26.96 |
| CDY48718 | Canola | cytosol | 20.12 | 26.68 |
| CDY46706 | Canola | mitochondrion | 28.86 | 26.64 |
| CDY27940 | Canola | cytosol | 30.49 | 26.6 |
| CDY21921 | Canola | plastid | 19.72 | 25.53 |
| CDX88733 | Canola | cytosol | 32.32 | 25.48 |
| CDY29993 | Canola | cytosol | 31.91 | 25.45 |
| CDY36353 | Canola | plastid | 16.06 | 25.32 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 34.15 | 25.26 |
| CDY64703 | Canola | cytosol | 33.94 | 25.15 |
| CDY36839 | Canola | cytosol | 30.89 | 25.12 |
| CDX71062 | Canola | cytosol | 31.91 | 25.08 |
| CDX74183 | Canola | cytosol | 17.48 | 25.0 |
| CDY22034 | Canola | endoplasmic reticulum | 31.91 | 24.96 |
| CDY06776 | Canola | cytosol | 14.43 | 24.91 |
| CDX97701 | Canola | cytosol | 10.57 | 24.53 |
| CDY27938 | Canola | cytosol | 21.54 | 24.15 |
| CDY09238 | Canola | cytosol | 22.97 | 23.79 |
| CDY09240 | Canola | cytosol | 22.76 | 23.58 |
| CDY52789 | Canola | cytosol | 18.7 | 22.66 |
| CDY52927 | Canola | cytosol | 17.07 | 22.28 |
| CDY40661 | Canola | cytosol | 34.15 | 22.05 |
| CDY63460 | Canola | cytosol, mitochondrion | 18.09 | 21.39 |
| CDY50383 | Canola | cytosol | 36.38 | 21.23 |
| CDX67463 | Canola | cytosol | 19.51 | 20.69 |
| CDY22035 | Canola | cytosol | 36.79 | 20.43 |
| CDY43524 | Canola | cytosol | 20.93 | 20.36 |
| CDY29992 | Canola | cytosol | 10.57 | 19.85 |
| CDX74184 | Canola | plasma membrane | 16.26 | 19.51 |
| CDX82703 | Canola | cytosol | 35.16 | 17.93 |
| CDY22052 | Canola | nucleus | 22.97 | 17.85 |
| KRG95394 | Soybean | nucleus | 20.53 | 17.81 |
| KRH67075 | Soybean | nucleus | 20.12 | 17.37 |
| CDY50382 | Canola | cytosol | 34.76 | 17.24 |
| CDY42579 | Canola | nucleus | 9.35 | 16.79 |
Protein Annotations
| MapMan:35.2 | GO:A0A078I291 | UniProt:A0A078I291 | EnsemblPlants:CDY44167 | ProteinID:CDY44167 | ProteinID:CDY44167.1 |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00079638001 | InterPro:IPR002219 | InterPro:PE/DAG-bd | PFAM:PF03107 | ScanProsite:PS01359 | PANTHER:PTHR32410 |
| SMART:SM00109 | SUPFAM:SSF57889 | UniParc:UPI0004EDBB84 | InterPro:Zinc_finger_PHD-type_CS | SEG:seg | : |
Description
BnaC01g22170DBnaC01g22170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I291]
Coordinates
chrLK032581:-:96792..98489
Molecular Weight (calculated)
56901.7 Da
IEP (calculated)
6.146
GRAVY (calculated)
-0.138
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MYYYCSICDF AIDLICVKKE VKKEIGDSKI HEHLLSLVPE MVSFTCHLCQ VLDDRFPFVC NLCDLSFHQD CAESISEINY SCHPQHPLKR FTRVPNRTGE
101: NCCLCGNKLH NVFYHCSVCN FSVDINCVKN PPPFSLLQPK AHEHPIILMP QRSFVCNACG MDDDPNPYFG IWDGIELEGI SETNIELKSY EVVEEGLIKH
201: SSHQNHVLKL NEESDADVEA IVCEACVYPV FCGPFYSCTE CDNYILHQKC AHLPKKKIDS FYKMDITLFP CDKMETILGL CEVCQHFFQG FRYITKDDIT
301: LDMRCGSISE PFFHESHPHH PLYIDFTGNK TCKACGDEAT FILSCQECGY FLDIKCPFLP NKVKHKYDKN HFLFLCYGKN PSDQYLCEIC EEELNSEKWF
401: YRCDECCITF HIKCTLGDLI SLKQIVDAEP IKLEVIRNIH MTRLVCAVCH SRCHFPYMLK CSSPLGMDTL CSLQCFRQKY FHKMTPLYEL SI
101: NCCLCGNKLH NVFYHCSVCN FSVDINCVKN PPPFSLLQPK AHEHPIILMP QRSFVCNACG MDDDPNPYFG IWDGIELEGI SETNIELKSY EVVEEGLIKH
201: SSHQNHVLKL NEESDADVEA IVCEACVYPV FCGPFYSCTE CDNYILHQKC AHLPKKKIDS FYKMDITLFP CDKMETILGL CEVCQHFFQG FRYITKDDIT
301: LDMRCGSISE PFFHESHPHH PLYIDFTGNK TCKACGDEAT FILSCQECGY FLDIKCPFLP NKVKHKYDKN HFLFLCYGKN PSDQYLCEIC EEELNSEKWF
401: YRCDECCITF HIKCTLGDLI SLKQIVDAEP IKLEVIRNIH MTRLVCAVCH SRCHFPYMLK CSSPLGMDTL CSLQCFRQKY FHKMTPLYEL SI
001: MEIIEGPKAH EHPLFLLPKM TMFTCHLCGL QDDRFPYACN LCNLSFHKDC AESTPEMKYS CHPKHILKRL TRVPSVDINC AKNPLPSTIV HLKAHEHLLT
101: LMPQRNFVCD ACGMDDDPNP YVCLPCNFMI HQNCIDKPSI IKIYRHDHRL YYNHCLDAGD WKCGVCNKEI NWTCGAYSCS KCPDFAIHPR CVKRFGIWDG
201: IELEGIPENN VEVKSYEVIE EGEIRHFSHE KHNLKLQEES DANNECMLCK ACNYPIYSNS FYSCMECDDF ILHKKCADLP KKKIDPFYNM LTTLITNDIR
301: ISICNACQNV SQGFTYVSDD HKIILDVRCG SISEPFVHES HPLHSLYISR STEEKFCIAC GDKATMVLSC EECDFILDIK CSNLPKMVKH KNDKDHLLSL
401: CYGEKTSEQY WCEICEEALN AKKWFYSCDD CDITFHIKCT LGDFVGMYQE AKDESFQTYM ILNNHINRPV CCCCESRCQF SSILRFYGKL ICSLQCLQKK
501: FQELHDDIS
101: LMPQRNFVCD ACGMDDDPNP YVCLPCNFMI HQNCIDKPSI IKIYRHDHRL YYNHCLDAGD WKCGVCNKEI NWTCGAYSCS KCPDFAIHPR CVKRFGIWDG
201: IELEGIPENN VEVKSYEVIE EGEIRHFSHE KHNLKLQEES DANNECMLCK ACNYPIYSNS FYSCMECDDF ILHKKCADLP KKKIDPFYNM LTTLITNDIR
301: ISICNACQNV SQGFTYVSDD HKIILDVRCG SISEPFVHES HPLHSLYISR STEEKFCIAC GDKATMVLSC EECDFILDIK CSNLPKMVKH KNDKDHLLSL
401: CYGEKTSEQY WCEICEEALN AKKWFYSCDD CDITFHIKCT LGDFVGMYQE AKDESFQTYM ILNNHINRPV CCCCESRCQF SSILRFYGKL ICSLQCLQKK
501: FQELHDDIS
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JKZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.