CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63290	Canola	cytosol	61.94	94.02
CDX74183	Canola	cytosol	30.18	66.86
CDX74184	Canola	plasma membrane	32.81	60.98
CDY64703	Canola	cytosol	51.71	59.34
CDY30007	Canola	cytosol, nucleus, plastid	51.31	58.8
AT4G01350.1	Thale cress	cytosol	48.69	56.9
AT5G59940.1	Thale cress	cytosol	47.51	55.61
AT5G59920.1	Thale cress	cytosol	50.52	54.23
AT5G59930.1	Thale cress	cytosol, nucleus, plasma membrane	44.49	51.68
CDX88733	Canola	cytosol	39.76	48.56
CDX71062	Canola	cytosol	39.76	48.4
CDY09238	Canola	cytosol	30.05	48.21
CDY09240	Canola	cytosol	29.92	48.0
CDY41709	Canola	peroxisome	32.02	46.39
CDX67463	Canola	cytosol	27.56	45.26
CDX97701	Canola	cytosol	11.94	42.92
CDY52927	Canola	cytosol	21.0	42.44
CDY48718	Canola	cytosol	20.08	41.24
CDY63456	Canola	cytosol	20.47	39.49
CDY22036	Canola	cytosol	30.84	39.43
CDY63460	Canola	cytosol, mitochondrion	21.39	39.18
CDY52787	Canola	nucleus	32.41	39.14
CDX93183	Canola	cytosol	34.12	39.04
CDY28703	Canola	cytosol	25.46	38.96
CDY52789	Canola	cytosol	20.73	38.92
CDY46706	Canola	mitochondrion	27.03	38.65
CDY30196	Canola	cytosol	20.73	38.63
CDY06776	Canola	cytosol	14.44	38.6
CDY58516	Canola	nucleus	25.33	38.45
CDY51540	Canola	nucleus	25.85	38.4
CDY65338	Canola	cytosol	33.73	38.36
CDY69979	Canola	nucleus	31.89	38.15
CDY36839	Canola	cytosol	29.66	37.36
CDY29992	Canola	cytosol	12.73	37.02
CDY27940	Canola	cytosol	26.51	35.82
CDY44574	Canola	cytosol	22.57	35.68
CDY60784	Canola	cytosol	15.62	35.42
CDY21921	Canola	plastid	17.59	35.26
CDY27938	Canola	cytosol	19.82	34.4
CDY22034	Canola	endoplasmic reticulum	28.22	34.18
CDY21132	Canola	cytosol	27.43	34.15
CDY22883	Canola	cytosol	29.27	34.15
CDY44167	Canola	cytosol	22.05	34.15
CDY29993	Canola	cytosol	27.43	33.87
CDY43524	Canola	cytosol	22.44	33.79
CDY42579	Canola	nucleus	11.68	32.48
CDY36353	Canola	plastid	12.6	30.77
CDY22052	Canola	nucleus	24.41	29.38
CDY50383	Canola	cytosol	32.28	29.18
CDY22035	Canola	cytosol	32.55	27.99
KRG95394	Soybean	nucleus	19.55	26.28
KRH67075	Soybean	nucleus	19.42	25.96
CDX82703	Canola	cytosol	32.81	25.91
CDY50382	Canola	cytosol	30.84	23.69

Protein Annotations

EnsemblPlants:CDY40661	EnsemblPlantsGene:GSBRNA2T00071534001	GO:A0A078HSG9	GO:GO:0003674	GO:GO:0003824	GO:GO:0047134
InterPro:DC1	PFAM:PF03107	ProteinID:CDY40661	ProteinID:CDY40661.1	SEG:seg	SUPFAM:SSF57889
UniParc:UPI0004EDF544	UniProt:A0A078HSG9	MapMan:35.2	:	:	:

Description

BnaC03g33770DBnaC03g33770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSG9]

Coordinates

chrLK032477:-:12677..16387

Molecular Weight (calculated)

85947.4 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.136

Length

762 amino acids

Sequence
(BLAST)

001: MDPNRSIYNL AIHKHPLFPS ARFFLGECAG CHVKEHIYGG YICNEPCCYG LFHKECAEAP PEINHHPSHL EHHLLLTNDS QPKDSPCDCC GKNLLSPCYT
101: CPTCEFKVDL ICGMKPSPPA IEHPMCHDHS LVFLKKREVE VPCDACKESI GGPSYSCLEC IHVYFHLDCV HLSKEMYHPC HPSHPLEVAE ESKKSLDLIC
201: GMKPSPPAIE HPMCHDHSLV FLKKREVEVP CEACKESIDG PSYSCLECIH VYFHLDCVHL SKEMYHPCHP KSEKSCYFCA AQPKVLYHCS ICNFSVCFGC
301: TKHPPPLVVE DPKTHKHPLS LFASQISFTC NRCGTESNDP KPYICVKCNF VVHGNCIGFP RVININRHDH RISFTYHPGR RGTHCGFCWG DVSQYYGAYV
401: CSVCPDYTVH SHCAVNIDVW NGVDLEGTPE RSEDIAPFKV VGHNLIRHFS HSKHTLRLLE DIVNIHDVYE CIRCDACVSP VGFGPPIYAC GDSGCLFLLH
501: EKCANFPIKK RLVFRTAPYM LECGDDAAIY CQMCGMLSDG FKYTSQGVTP RHCVDVHCSS LPEPFVHNVH SHPLLNYRIT NIVCRACKRL SNDNVFACYA
601: CNFFLCLYCA TLPEKILHMS SDDEHPLTLY YGEKSNGTSW CGVCESELDP SNCLYTCSEC GVALHVQCAF GDFSRLKPGR IYNFGERDYK VVLNSGNTRP
701: FCSHCHSRCK VPFILRDKSK DNGYICSLSC LSIGLGIRQC IHLFTFMFFK FFFSSCLGIK FG

Best Arabidopsis Sequence Match ( AT5G59920.1 )
(BLAST)

001: MATEAVDLPI HEHPLFPSAR CIDDECDGCH VNGFMYAGYF CNEPYCYVWF HKDCAEAPGE ISHSSHPEHP LLLTNDSKDG PCDLCGQKLL TPCYSCPTCE
101: FKVDLTCGMK PSPPAIEHPL CHDHAVVFLK IREEKVPCEL CKESIEGPSY SCLECDMYFH VNCVHLSEEV NHPCHSIHPL KLITSESLTD DAEKSCLLCG
201: NIPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHMKTHKHP LTLLPRRISC ICDVCGKKCQ FTAYVCLQCD FVTARKCIDR PRVININRHD HRIYLTHHLG
301: TGYSECGVCH KNVSQYKGAY SCSVCPNYAV HSTCAVRTDV WDGVELEGTT EITEDISPFK VVGDNLICHF SHEEHQLKLH KEDVIHDERR RCEACIHPVQ
401: FGSIYVCEEE ECCFVLHEKC ANLPMKKRLV FGTRPYTLMK ETTEITHCEL CGILSDGFAY SSHEWSDVDV HCGSLNEPLV HDGHIHPLYF AKKEEHTCDG
501: CQKSIEDYML RCKACDFDLC LYCATLPEKI WHRNDGHPLT LCCGEKEEAS GKYWCDICEK ELDPSIWFYT CYDCGVTLHA QCVLGDFSRL VLGQIYSFGE
601: KEIEFEAVPN NINTRPFCIQ CNSRCKVSVI LKILKDSEDG SDDGSDDVSD DVSDDPSNDV SDDTSDDDSD VVSDVVSDDA SNDDSDDTSD DHNGYICSRS
701: CLSSYLGEEI

Arabidopsis Description

ULI3Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q8W2D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.