CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74505
CDX80039
CDX97692
CDX98183
CDY09178
CDY09179
CDY12335
CDY16531
CDY20141
CDY20854
CDY21857
CDY21921
CDY22034
CDY22035
CDY22036
CDY22052
CDY26965
CDY26966
CDY30094
CDY31715
CDY32837
CDY41548
CDY41709
CDY42827
CDY48020
CDY50382
CDY50383
CDY51514
CDY52787
CDY52789
CDY55390
CDY61202
CDY61552
CDY65338
CDY69109
CDY69979

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22355.1	CDY16531	AT1G49850.1	21798944
AT5G22355.1	CDY20854	AT1G49850.1	21798944
AT5G22355.1	CDY32837	AT1G49850.1	21798944
AT5G22355.1	CDY61552	AT1G49850.1	21798944
AT5G22355.1	CDY42827	AT2G42580.1	21798944
AT5G22355.1	CDY51514	AT2G42580.1	21798944
AT5G22355.1	CDY55390	AT2G42580.1	21798944
AT5G22355.1	CDY61202	AT2G42580.1	21798944
AT5G22355.1	CDX80039	AT2G46690.1	21798944
AT5G22355.1	CDY41548	AT2G46690.1	21798944
AT5G22355.1	CDY48020	AT2G46690.1	21798944
AT5G22355.1	CDX97692	AT3G15660.1	21798944
AT5G22355.1	CDY20141	AT3G15660.1	21798944
AT5G22355.1	CDY21857	AT3G15660.1	21798944
AT5G22355.1	CDY30094	AT3G15660.1	21798944
AT5G22355.1	CDY12335	AT3G43240.1	21798944
AT5G22355.1	CDY21921	AT4G01920.1	21798944
AT5G22355.1	CDY22034	AT4G01920.1	21798944
AT5G22355.1	CDY22035	AT4G01920.1	21798944
AT5G22355.1	CDY22036	AT4G01920.1	21798944
AT5G22355.1	CDY22052	AT4G01920.1	21798944
AT5G22355.1	CDY50382	AT4G01920.1	21798944
AT5G22355.1	CDY50383	AT4G01920.1	21798944
AT5G22355.1	CDY52787	AT4G01920.1	21798944
AT5G22355.1	CDY52789	AT4G01920.1	21798944
AT5G22355.1	CDY65338	AT4G01920.1	21798944
AT5G22355.1	CDY69979	AT4G01920.1	21798944
AT5G22355.1	CDY41709	AT5G22355.1	21798944
AT5G22355.1	CDX74505	AT5G22890.1	21798944
AT5G22355.1	CDX98183	AT5G22890.1	21798944
AT5G22355.1	CDY09178	AT5G22890.1	21798944
AT5G22355.1	CDY09179	AT5G22890.1	21798944
AT5G22355.1	CDY26965	AT5G22890.1	21798944
AT5G22355.1	CDY26966	AT5G22890.1	21798944
AT5G22355.1	CDY31715	AT5G22890.1	21798944
AT5G22355.1	CDY69109	AT5G22890.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97701	Canola	cytosol	18.25	45.28
AT5G22355.1	Thale cress	cytosol	56.46	44.73
CDY30196	Canola	cytosol	34.22	44.01
CDY63290	Canola	cytosol	40.87	42.83
AT3G48400.1	Thale cress	cytosol	49.24	41.84
CDY46706	Canola	mitochondrion	42.4	41.84
CDY63456	Canola	cytosol	30.8	41.01
CDY58516	Canola	nucleus	38.4	40.24
CDY27940	Canola	cytosol	42.02	39.18
CDY36839	Canola	cytosol	45.06	39.17
CDY51540	Canola	nucleus	37.64	38.6
CDY52927	Canola	cytosol	27.57	38.46
CDY21921	Canola	plastid	27.57	38.16
CDY28703	Canola	cytosol	35.93	37.95
CDY22036	Canola	cytosol	42.97	37.92
CDX74183	Canola	cytosol	24.52	37.5
CDY60784	Canola	cytosol	23.95	37.5
CDY44574	Canola	cytosol	34.03	37.14
CDX93183	Canola	cytosol	45.63	36.04
CDY64703	Canola	cytosol	45.25	35.84
CDX67463	Canola	cytosol	31.37	35.56
CDY06776	Canola	cytosol	19.2	35.44
CDY69979	Canola	nucleus	42.21	34.85
CDY30007	Canola	cytosol, nucleus, plastid	43.92	34.74
CDY09238	Canola	cytosol	31.18	34.53
CDY52787	Canola	nucleus	41.25	34.39
CDY65338	Canola	cytosol	43.73	34.33
CDY09240	Canola	cytosol	30.99	34.32
CDX88733	Canola	cytosol	40.11	33.81
CDY27938	Canola	cytosol	28.14	33.71
CDX71062	Canola	cytosol	39.92	33.55
CDY48718	Canola	cytosol	23.0	32.61
CDY22034	Canola	endoplasmic reticulum	38.78	32.43
CDY21132	Canola	cytosol	37.64	32.35
CDY40661	Canola	cytosol	46.39	32.02
CDY52789	Canola	cytosol	24.52	31.77
CDY29993	Canola	cytosol	37.26	31.77
CDY29992	Canola	cytosol	15.59	31.3
CDY43524	Canola	cytosol	30.04	31.23
CDY44167	Canola	cytosol	29.09	31.1
CDY22883	Canola	cytosol	38.21	30.78
CDX74184	Canola	plasma membrane	23.38	30.0
CDY36353	Canola	plastid	17.11	28.85
CDY63460	Canola	cytosol, mitochondrion	22.62	28.61
CDY42579	Canola	nucleus	14.83	28.47
CDY50383	Canola	cytosol	42.78	26.69
CDY22035	Canola	cytosol	43.92	26.07
KRG95394	Soybean	nucleus	27.0	25.04
KRH67075	Soybean	nucleus	26.62	24.56
CDY22052	Canola	nucleus	27.95	23.22
CDX82703	Canola	cytosol	42.4	23.11
CDY50382	Canola	cytosol	41.44	21.98

Protein Annotations

EnsemblPlants:CDY41709	EnsemblPlantsGene:GSBRNA2T00073420001	GO:A0A078HWC8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0046872	GO:GO:0047134	InterPro:DC1	InterPro:Znf_PHD	PANTHER:PTHR32410	PFAM:PF03107
ProteinID:CDY41709	ProteinID:CDY41709.1	SMART:SM00249	SUPFAM:SSF57889	UniParc:UPI0004EEDCA2	UniProt:A0A078HWC8
MapMan:35.2	:	:	:	:	:

Description

BnaA09g15370DBnaA09g15370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWC8]

Coordinates

chrLK032504:+:94698..96692

Molecular Weight (calculated)

60567.2 Da

IEP (calculated)

7.723

GRAVY (calculated)

-0.471

Length

526 amino acids

Sequence
(BLAST)

001: MEVSALKLPI HKHRYRCNDS GCYNNANPGG WFHKECGESP SEINHPSHPE HPLTFNAKTG YKRCHLCGLL IRTHVLYHCS KCNFSICIDC KRNPPPLTVQ
101: HTKTHRHTLS LLARRVSFTC NVCGMQGDRS PYSCIQCSFL VHRDCIDLPR VININRHDHR ISLTDHIGRR GNLKCGVCHQ SVNQYCGGYT CSTCPDFVVH
201: SSCPTKHRVW DGVELQGIPE EEEVIPPFKV VGDNLIKHFS HENHILRLES DGTSTRDEKT RCEACVSPVY SDPVYSCEQC GFILHETCAN LPRKKRLPFR
301: NIEFKLYAPD MDSYEAFECY ACKTMFSGFR YKAYRISIDV RCGTFSELES YDFHDHPAVY YNDKKASPRC RACHQRGEMS QHMLSCDDCD FALDFRCFNL
401: PRVVKHKDDE PPLSLCYGED PNGNYWCDIC EGETNPKDWF YTCSHSGVTL HVQCVLGDFS FLMPRRMIKY RRYCKFEVVP NDHCSRPFCA CCQSRCIGPF
501: FLTISNPEII YICSEGCLKK RSLSHL

Best Arabidopsis Sequence Match ( AT5G22355.1 )
(BLAST)

001: MDLPPKILPT HKYPLTISTR FVNDSCKGCN IKGPIYGGYR CNEPSSTSLF FHKECAEAPP EIINHPSHPQ HTLKLHNSLR NPCKCNLCGK TFFAFGYRCS
101: SKCDFIVDLT CGINPLPVSI EHPKSHHHPV IFLKEPAKPG RRRCGICKGY NGGCSYACLE CEVHFHVECV NLSQEVNHPS HPQHSLKLLE YESLTSDAEE
201: TCLLCGERPD KVLYRCSICN FSVCRFCTKD PPPLAIEHHK THEHRLVLLS RLISFECNAC GMQGDRSPYM CVQCGFVVHR TCIDLPRVIN INRHDHRISF
301: THHLGVGYSR CGICRKDISQ YHGAYLCPRC PNYAAHSLCA TRKDVWDGVE LEGTPDDDDE DIVPFKVVGD NLIKHFSHEE HNLRLNKDNI NRDEGSRCEA
401: CVLPIYSDPI YNCEECRFIL HEKCANHPKK KRHVFHTKPF TLWSRPPRTF HSKDFRFYDV FRCYACRTKS TGFRYVSDWW VLDVRCGSRS EPVIHDGHRH
501: PLYYEHKKDH CCDACYKEID GYLLSCDTCD FDLDLHCTDL PKTVKHSCDN HPLSLCYGEN ATGKYWCDIC EAETDPSKWF YTCSKCVVTA HIECVLGDFS
601: RLMPGRIINY NNVRVEVVLN SYSSRPFCAK CHSRCRAPII LKLCDPYTGY ICSDACVVPD YQYS

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.