Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000267.1-P | Field mustard | cytosol | 99.85 | 99.7 |
| CDY42827 | Canola | cytosol | 95.53 | 95.53 |
| CDY55390 | Canola | cytosol | 86.59 | 86.85 |
| CDY51514 | Canola | cytosol | 86.44 | 86.7 |
| AT2G42580.1 | Thale cress | cytosol | 87.18 | 84.66 |
| CDX71941 | Canola | cytosol | 73.32 | 73.0 |
| CDY49237 | Canola | cytosol | 71.83 | 72.26 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 23.7 | 60.23 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 61.4 | 58.03 |
| KRH22291 | Soybean | plastid | 49.63 | 57.02 |
| GSMUA_Achr10P... | Banana | cytosol | 53.95 | 54.27 |
| Os01t0218200-00 | Rice | plastid | 51.42 | 51.34 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 50.97 | 50.89 |
| EES02247 | Sorghum | plastid | 51.86 | 50.88 |
| Zm00001d039362_P002 | Maize | cytosol | 50.52 | 50.6 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 50.67 | 50.37 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 50.22 | 50.15 |
| Zm00001d008930_P003 | Maize | cytosol | 50.22 | 49.93 |
| CDY25722 | Canola | cytosol, plastid | 49.63 | 49.92 |
| CDY00576 | Canola | cytosol | 8.64 | 49.57 |
| KRH27037 | Soybean | nucleus | 49.48 | 49.19 |
| CDY45930 | Canola | cytosol | 48.29 | 49.17 |
| CDY02514 | Canola | cytosol, plastid | 49.03 | 49.1 |
| CDY25865 | Canola | cytosol | 48.14 | 49.09 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 49.93 | 48.91 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 47.24 | 48.84 |
| EES01073 | Sorghum | cytosol | 48.88 | 48.16 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 35.47 | 47.32 |
| Zm00001d044479_P001 | Maize | cytosol | 47.99 | 47.28 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 47.24 | 47.1 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 49.93 | 47.05 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 48.14 | 46.95 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 15.5 | 46.85 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 47.99 | 46.8 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 47.99 | 46.8 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 46.2 | 46.55 |
| Os05t0210600-01 | Rice | cytosol | 27.72 | 46.38 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 47.84 | 46.25 |
| Zm00001d011352_P001 | Maize | cytosol | 46.65 | 45.96 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 47.09 | 45.93 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 47.69 | 45.91 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 47.69 | 45.85 |
| Os05t0587300-01 | Rice | cytosol | 37.85 | 45.77 |
| OQU78515 | Sorghum | cytosol | 47.24 | 45.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.99 | 42.54 |
| CDY08814 | Canola | cytosol, plastid | 24.89 | 39.76 |
| CDX81156 | Canola | cytosol | 26.08 | 39.24 |
| CDX78366 | Canola | cytosol | 26.08 | 39.24 |
| CDX97619 | Canola | cytosol | 41.13 | 38.07 |
| CDX98517 | Canola | cytosol | 40.98 | 37.98 |
| CDY32327 | Canola | cytosol | 41.13 | 37.86 |
| CDY20095 | Canola | nucleus | 40.83 | 37.64 |
| CDX85779 | Canola | cytosol | 28.61 | 33.39 |
| CDY40820 | Canola | mitochondrion | 13.86 | 33.1 |
| CDY40077 | Canola | cytosol | 28.32 | 33.04 |
| CDX88420 | Canola | cytosol | 25.48 | 32.51 |
| CDX69861 | Canola | cytosol, mitochondrion | 27.12 | 32.5 |
| CDX79246 | Canola | cytosol | 24.74 | 32.42 |
| CDX68030 | Canola | cytosol | 24.59 | 32.42 |
| CDY21634 | Canola | cytosol, mitochondrion | 26.97 | 32.32 |
| CDX87474 | Canola | cytosol | 25.34 | 32.32 |
| CDY34222 | Canola | cytosol | 14.61 | 31.82 |
| CDY34223 | Canola | cytosol | 15.05 | 30.98 |
| CDY68462 | Canola | cytosol | 27.12 | 30.9 |
| CDY34224 | Canola | cytosol | 3.13 | 30.43 |
| Zm00001d009724_P009 | Maize | cytosol | 44.26 | 27.78 |
| CDY39682 | Canola | cytosol | 9.24 | 22.38 |
| CDX72245 | Canola | cytosol | 8.64 | 22.05 |
| CDY65185 | Canola | cytosol | 8.79 | 21.3 |
| CDY28190 | Canola | extracellular | 2.98 | 19.61 |
| CDX68662 | Canola | endoplasmic reticulum, mitochondrion | 2.98 | 19.61 |
| CDX85780 | Canola | nucleus | 9.69 | 13.71 |
| Zm00001d006366_P001 | Maize | cytosol | 0.15 | 0.43 |
| Zm00001d033961_P001 | Maize | cytosol | 0.15 | 0.43 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | GO:A0A078JB08 | UniProt:A0A078JB08 | EnsemblPlants:CDY61202 |
| ProteinID:CDY61202 | ProteinID:CDY61202.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00030714001 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | PFAM:PF00085 | PFAM:PF13432 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI0004EEF50A | SEG:seg | : | : | : | : |
Description
BnaA03g56720DBnaA03g56720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB08]
Coordinates
chrLK033968:-:15864..18677
Molecular Weight (calculated)
73562.8 Da
IEP (calculated)
8.998
GRAVY (calculated)
-0.441
Length
671 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHSRRLSLE PAIDSTSRRF RDSLTLQRHD DDVNKPDFRE LDLGSPVSTL TPRVSSSSAA ATPTSSSGSS GSVSGKPSVT SQMVKSHSGE ISRSAMPTTT
101: TRNLKPGHRR SSSTGTPLIF SGSSFYSGAS QSSGATSAVS PSPTVLPAGN ICPSGRILKT GMATRSSTRA ETLWTGTGNY GHGNVVKSGG GSTGKTNHAV
201: ANGESSEELK RLGNDMYRRG SFTEALSFYD RAISLSPENA SYRSNRAAAL TALRRLGEAV KECLEAVRLD PSYSRAHQRL ASLYLRLGEA ENARRHLCFS
301: GQCPDQADLQ RLQTLEKHLR RCWEARKIGD WRTAVKETDA AIANGADSSP QLVACKAEAL LRLNQIEESE FCLSCIPRLD HHQSQAKLFG MVAEAYVLCI
401: QAQVDMALGR FENGVIKAER ASMLDQTNPE LVSVLNNVKM VAKARSRGNE LFSSGRYSEA SVAYGDGLKY DGSNSVLYCN RAACWYKLGL WEKSVEDCNQ
501: ALKIHSGYIK ALLRRAASYG KLGRWEDAVR DYEFVRRELP GDSEVAESLE RAKTALSQES KSLGFNNEVE AVSSLDKFKN SVSLPGVSVF HFKSSSNRQC
601: EEISPYVNTL CLRYPLVHFF MVDVEESLAL AKAESIRKVP TFKMYKNGDK VKEMICPSHQ FLEDSIKHFL L
101: TRNLKPGHRR SSSTGTPLIF SGSSFYSGAS QSSGATSAVS PSPTVLPAGN ICPSGRILKT GMATRSSTRA ETLWTGTGNY GHGNVVKSGG GSTGKTNHAV
201: ANGESSEELK RLGNDMYRRG SFTEALSFYD RAISLSPENA SYRSNRAAAL TALRRLGEAV KECLEAVRLD PSYSRAHQRL ASLYLRLGEA ENARRHLCFS
301: GQCPDQADLQ RLQTLEKHLR RCWEARKIGD WRTAVKETDA AIANGADSSP QLVACKAEAL LRLNQIEESE FCLSCIPRLD HHQSQAKLFG MVAEAYVLCI
401: QAQVDMALGR FENGVIKAER ASMLDQTNPE LVSVLNNVKM VAKARSRGNE LFSSGRYSEA SVAYGDGLKY DGSNSVLYCN RAACWYKLGL WEKSVEDCNQ
501: ALKIHSGYIK ALLRRAASYG KLGRWEDAVR DYEFVRRELP GDSEVAESLE RAKTALSQES KSLGFNNEVE AVSSLDKFKN SVSLPGVSVF HFKSSSNRQC
601: EEISPYVNTL CLRYPLVHFF MVDVEESLAL AKAESIRKVP TFKMYKNGDK VKEMICPSHQ FLEDSIKHFL L
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.