Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P08560_001 | Banana | cytosol | 78.43 | 74.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.35 | 68.66 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 50.39 | 65.01 |
| GSMUA_Achr10P... | Banana | cytosol | 62.4 | 60.72 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 65.18 | 59.41 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 24.04 | 59.09 |
| EES01073 | Sorghum | cytosol | 61.02 | 58.15 |
| Zm00001d044479_P001 | Maize | cytosol | 60.4 | 57.56 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 59.48 | 57.36 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 60.4 | 56.98 |
| Os05t0210600-01 | Rice | cytosol | 35.13 | 56.86 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 60.25 | 56.83 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 60.25 | 56.83 |
| Zm00001d011352_P001 | Maize | cytosol | 59.32 | 56.53 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 60.09 | 56.2 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 60.4 | 56.16 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 60.25 | 56.1 |
| KRH21985 | Soybean | cytosol | 59.63 | 55.92 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 59.01 | 55.67 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 57.47 | 55.51 |
| KRH27330 | Soybean | cytosol | 59.63 | 55.44 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 57.47 | 55.26 |
| Os01t0218200-00 | Rice | plastid | 57.16 | 55.21 |
| OQU78515 | Sorghum | cytosol | 59.32 | 55.0 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 58.71 | 54.98 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 56.86 | 54.91 |
| Zm00001d039362_P002 | Maize | cytosol | 56.24 | 54.48 |
| Zm00001d008930_P003 | Maize | cytosol | 56.55 | 54.37 |
| EES02247 | Sorghum | plastid | 57.16 | 54.24 |
| KRH26223 | Soybean | nucleus | 56.39 | 54.14 |
| KRH55099 | Soybean | nucleus | 56.24 | 53.83 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 58.4 | 53.38 |
| Bra038116.1-P | Field mustard | cytosol | 53.0 | 52.28 |
| CDY25865 | Canola | cytosol | 53.0 | 52.28 |
| Os05t0587300-01 | Rice | cytosol | 44.68 | 52.25 |
| CDY45930 | Canola | cytosol | 52.85 | 52.05 |
| Solyc07g062580.2.1 | Tomato | cytosol | 55.93 | 51.78 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 53.0 | 51.34 |
| CDY02514 | Canola | cytosol, plastid | 53.0 | 51.34 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 52.54 | 51.2 |
| PGSC0003DMT400032362 | Potato | cytosol | 55.16 | 51.14 |
| PGSC0003DMT400054803 | Potato | cytosol | 23.11 | 51.02 |
| CDY25722 | Canola | cytosol, plastid | 52.23 | 50.82 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 17.26 | 50.45 |
| KRH22291 | Soybean | plastid | 45.15 | 50.17 |
| CDY49237 | Canola | cytosol | 49.92 | 48.58 |
| Bra007405.1-P | Field mustard | cytosol | 50.23 | 48.44 |
| CDX71941 | Canola | cytosol | 49.92 | 48.07 |
| AT1G53300.1 | Thale cress | cytosol | 51.62 | 47.93 |
| AT3G58620.1 | Thale cress | cytosol | 49.77 | 47.36 |
| CDY61202 | Canola | cytosol | 48.84 | 47.24 |
| Bra000267.1-P | Field mustard | cytosol | 48.84 | 47.17 |
| CDY42827 | Canola | cytosol | 48.38 | 46.8 |
| AT2G42580.1 | Thale cress | cytosol | 49.61 | 46.6 |
| CDY34224 | Canola | cytosol | 4.93 | 46.38 |
| CDY51514 | Canola | cytosol | 47.61 | 46.19 |
| CDY55390 | Canola | cytosol | 47.3 | 45.89 |
| Bra004709.1-P | Field mustard | cytosol | 45.92 | 45.36 |
| PGSC0003DMT400054911 | Potato | cytosol | 35.9 | 44.72 |
| Solyc10g007230.1.1 | Tomato | cytosol | 40.22 | 43.79 |
| PGSC0003DMT400054904 | Potato | cytosol | 40.52 | 43.54 |
| PGSC0003DMT400054902 | Potato | cytosol | 20.03 | 43.48 |
| Solyc10g007240.1.1 | Tomato | cytosol | 39.45 | 43.1 |
| KRH27037 | Soybean | nucleus | 44.53 | 42.81 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 40.52 | 42.76 |
| AT3G14950.1 | Thale cress | cytosol | 47.77 | 42.47 |
| Bra023795.1-P | Field mustard | cytosol | 5.7 | 42.05 |
| Solyc10g007220.1.1 | Tomato | cytosol | 32.67 | 41.98 |
| Solyc10g007250.1.1 | Tomato | cytosol | 17.57 | 40.86 |
| Solyc10g007420.2.1 | Tomato | cytosol | 26.35 | 40.24 |
| CDY20095 | Canola | nucleus | 44.53 | 39.7 |
| CDY32327 | Canola | cytosol | 44.53 | 39.64 |
| Bra027292.1-P | Field mustard | cytosol | 44.68 | 39.51 |
| CDX98517 | Canola | cytosol | 44.07 | 39.5 |
| CDX97619 | Canola | cytosol | 43.91 | 39.31 |
| Bra021583.1-P | Field mustard | nucleus | 45.15 | 38.76 |
| PGSC0003DMT400091014 | Potato | nucleus | 35.44 | 37.89 |
| PGSC0003DMT400054909 | Potato | cytosol | 23.88 | 37.62 |
| CDY40820 | Canola | mitochondrion | 16.02 | 37.01 |
| CDY34222 | Canola | cytosol | 17.41 | 36.69 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 21.26 | 36.51 |
| Bra023793.1-P | Field mustard | cytosol | 22.65 | 35.68 |
| CDY34223 | Canola | cytosol | 17.72 | 35.28 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 17.57 | 34.97 |
| GSMUA_Achr11P... | Banana | plastid | 30.82 | 34.19 |
| Zm00001d009724_P009 | Maize | cytosol | 56.24 | 34.14 |
| GSMUA_Achr3P24690_001 | Banana | cytosol | 35.29 | 33.73 |
| GSMUA_Achr2P02050_001 | Banana | cytosol | 8.32 | 23.68 |
| Zm00001d006366_P001 | Maize | cytosol | 0.62 | 1.72 |
| Zm00001d033961_P001 | Maize | cytosol | 0.62 | 1.72 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 |
| EnsemblPlantsGene:GSMUA_Achr7G24480_001 | EnsemblPlants:GSMUA_Achr7P24480_001 | EnsemblPlants:GSMUA_Achr7T24480_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 |
| InterPro:IPR019734 | UniProt:M0TKD4 | PFAM:PF00085 | PFAM:PF13414 | PFAM:PF13432 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF395 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00029489F0 |
| SEG:seg | : | : | : | : | : |
Description
TPR repeat-containing thioredoxin TTL1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G24480_001]
Coordinates
chr7:+:26407409..26410789
Molecular Weight (calculated)
70180.2 Da
IEP (calculated)
8.509
GRAVY (calculated)
-0.401
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRAGETSRP DQKAGSGLAA PGQVEPVADR FQAALRMDEN KPDFPDLGSP VSPLRPCPAN SSSSSSSSGS ASGKVAPLPH SPSGPAARRP AAPDPERRSH
101: YGELSGEISQ HQSGSGPLIF SVGGGCGGSI CTASSPNTNV LPTGNIYPSG KIGKTGMMPR TTPRSDVLGR ATGRMDPQEV TRAGNEHYKR GQYGEALAFY
201: DRAVAMCPEN APCRSNRAAA LMGLGRLKEA VRECEEAVRL DPANGRAHHR LACLNLRLGL VEDARKHLLL TGQPPDPVEL QKTQAVERHL VKCGDARKIG
301: DWKSALREAD AAIAAGADSS PPLIASRAEA LLHLQHPDEA DSVLSRSSEF KDSLPFSSAT KIFGMLSSSY FYIVRAQVDM AMGRFDNAVT AAEKARKVDA
401: RNVEVTMVMS NVRSVARARA QGNELFKLGN FAEACAAYGE GLRYNTSNSV LLCNRAACRS KLGQWQKSVD DCSEALRIRP NYTKALLRRA DSYAKLECWA
501: ECVRDYEVLR KELPRDTEVA EALFHAQVAL KTCRGEDVSN LKFGGEVEEV TGVEQFRAAI SFPGASVVYF MVASNPQCTE ITPSVDALCN RYPSANFLRV
601: DINRSPDVAK AENVKIVPTF KIYKNGTRVK EMICPSQQVL EYSVRHYGL
101: YGELSGEISQ HQSGSGPLIF SVGGGCGGSI CTASSPNTNV LPTGNIYPSG KIGKTGMMPR TTPRSDVLGR ATGRMDPQEV TRAGNEHYKR GQYGEALAFY
201: DRAVAMCPEN APCRSNRAAA LMGLGRLKEA VRECEEAVRL DPANGRAHHR LACLNLRLGL VEDARKHLLL TGQPPDPVEL QKTQAVERHL VKCGDARKIG
301: DWKSALREAD AAIAAGADSS PPLIASRAEA LLHLQHPDEA DSVLSRSSEF KDSLPFSSAT KIFGMLSSSY FYIVRAQVDM AMGRFDNAVT AAEKARKVDA
401: RNVEVTMVMS NVRSVARARA QGNELFKLGN FAEACAAYGE GLRYNTSNSV LLCNRAACRS KLGQWQKSVD DCSEALRIRP NYTKALLRRA DSYAKLECWA
501: ECVRDYEVLR KELPRDTEVA EALFHAQVAL KTCRGEDVSN LKFGGEVEEV TGVEQFRAAI SFPGASVVYF MVASNPQCTE ITPSVDALCN RYPSANFLRV
601: DINRSPDVAK AENVKIVPTF KIYKNGTRVK EMICPSQQVL EYSVRHYGL
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.