CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27330	Soybean	cytosol	94.65	93.84
KRH26223	Soybean	nucleus	74.13	75.89
KRH55099	Soybean	nucleus	73.99	75.52
VIT_19s0014g01470.t01	Wine grape	cytosol	71.68	71.57
Bra038116.1-P	Field mustard	cytosol	62.57	65.81
CDY25865	Canola	cytosol	62.43	65.65
CDY45930	Canola	cytosol	62.43	65.55
Bra030946.1-P	Field mustard	cytosol, plastid	63.44	65.52
CDY02514	Canola	cytosol, plastid	63.44	65.52
CDY25722	Canola	cytosol, plastid	62.57	64.92
PGSC0003DMT400032362	Potato	cytosol	64.31	63.57
AT1G53300.1	Thale cress	cytosol	64.02	63.38
Solyc07g062580.2.1	Tomato	cytosol	64.16	63.34
GSMUA_Achr10P...	Banana	cytosol	58.09	60.27
GSMUA_Achr7P24480_001	Banana	cytosol	55.92	59.63
GSMUA_Achr4P08560_001	Banana	cytosol	58.67	59.27
KRH22291	Soybean	plastid	49.42	58.56
PGSC0003DMT400054803	Potato	cytosol	24.86	58.5
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	41.47	57.06
TraesCS3B01G162100.1	Wheat	cytosol	54.91	56.55
Os01t0218200-00	Rice	plastid	54.91	56.55
TraesCS3D01G144600.1	Wheat	cytosol	54.62	56.0
TraesCS3A01G143000.1	Wheat	cytosol	54.19	55.8
Zm00001d039362_P002	Maize	cytosol	53.61	55.37
Zm00001d008930_P003	Maize	cytosol	53.76	55.11
EES02247	Sorghum	plastid	54.34	54.97
EES01073	Sorghum	cytosol	54.05	54.92
Zm00001d044479_P001	Maize	cytosol	53.9	54.77
GSMUA_Achr3P25160_001	Banana	cytosol	56.21	54.63
Os05t0210600-01	Rice	cytosol	30.92	53.37
HORVU1Hr1G093390.2	Barley	cytosol	51.45	52.9
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	52.31	52.62
HORVU3Hr1G027650.2	Barley	mitochondrion	50.58	52.55
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	52.17	52.47
TraesCS3A01G221800.1	Wheat	cytosol	52.17	52.47
Zm00001d011352_P001	Maize	cytosol	51.59	52.42
PGSC0003DMT400054902	Potato	cytosol	22.54	52.17
TraesCS1B01G462300.1	Wheat	cytosol	52.31	52.16
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	51.73	52.03
TraesCS1D01G437100.1	Wheat	nucleus	52.31	51.86
KRH27037	Soybean	nucleus	50.43	51.7
TraesCS1A01G427400.1	Wheat	cytosol	52.02	51.65
PGSC0003DMT400054796	Potato	cytosol, plastid	45.81	51.54
GSMUA_AchrUn_...	Banana	cytosol	19.8	51.12
OQU78515	Sorghum	cytosol	50.87	50.29
AT3G14950.1	Thale cress	cytosol	53.03	50.27
PGSC0003DMT400054904	Potato	cytosol	43.35	49.67
Solyc10g007240.1.1	Tomato	cytosol	42.49	49.49
Solyc10g007230.1.1	Tomato	cytosol	42.49	49.33
CDY34224	Canola	cytosol	4.91	49.28
PGSC0003DMT400054909	Potato	cytosol	28.76	48.3
PGSC0003DMT400054911	Potato	cytosol	36.27	48.18
Os05t0587300-01	Rice	cytosol	38.44	47.93
CDY20095	Canola	nucleus	50.14	47.66
CDY32327	Canola	cytosol	50.14	47.6
Bra027292.1-P	Field mustard	cytosol	50.29	47.41
CDX98517	Canola	cytosol	49.57	47.38
CDX97619	Canola	cytosol	49.42	47.17
Bra023795.1-P	Field mustard	cytosol	5.92	46.59
Solyc10g007420.2.1	Tomato	cytosol	28.61	46.59
Zm00001d004494_P001	Maize	cytosol, mitochondrion	14.88	46.4
Bra021583.1-P	Field mustard	nucleus	50.58	46.3
Solyc10g007220.1.1	Tomato	cytosol	33.38	45.74
Solyc10g007430.1.1	Tomato	cytosol, plastid	23.7	43.39
Solyc10g007250.1.1	Tomato	cytosol	17.49	43.37
CDY40820	Canola	mitochondrion	17.34	42.7
CDY34222	Canola	cytosol	18.79	42.21
PGSC0003DMT400091014	Potato	nucleus	36.99	42.17
KRH59356	Soybean	plastid	24.57	39.63
Bra023793.1-P	Field mustard	cytosol	23.27	39.08
KRH08675	Soybean	cytosol, mitochondrion, plastid	18.35	37.8
CDY34223	Canola	cytosol	17.77	37.73
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	17.34	36.81
KRH62368	Soybean	cytosol	34.54	36.54
KRH15375	Soybean	cytosol	12.72	35.2
KRH43206	Soybean	cytosol, plastid	27.75	35.04
KRH53085	Soybean	cytosol	34.97	34.67
KRH31282	Soybean	plastid	28.61	34.02
KRG97591	Soybean	plastid	26.59	33.58
KRH16702	Soybean	nucleus	33.67	33.57
KRH18895	Soybean	cytosol	33.53	33.0
Zm00001d009724_P009	Maize	cytosol	50.0	32.37
KRH09945	Soybean	cytosol, endoplasmic reticulum	2.17	25.86
KRH23391	Soybean	cytosol	6.36	24.58
KRG99844	Soybean	cytosol	9.1	23.51
KRH46794	Soybean	cytosol	7.66	19.2
Zm00001d006366_P001	Maize	cytosol	0.43	1.29
Zm00001d033961_P001	Maize	cytosol	0.43	1.29

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100795358	MapMan:11.3.2.5	Gene3D:3.40.30.10	EMBL:ACUP02008374	EnsemblPlantsGene:GLYMA_13G270900
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	UniProt:I1M319	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR013766	InterPro:IPR019734	EnsemblPlants:KRH21985	ProteinID:KRH21985	ProteinID:KRH21985.1	PFAM:PF00085
PFAM:PF13181	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000233B92A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:-:37283330..37287169

Molecular Weight (calculated)

75733.1 Da

IEP (calculated)

8.558

GRAVY (calculated)

-0.509

Length

692 amino acids

Sequence
(BLAST)

001: MSHSSGKPVS EVVGIDATFS DRFRDALTCD DNNNINKPDF RELDLGSPVS PLRTTRGPAA SSSSSSSGSF SGRTGPTRKP ESAQNNSNTN THIHSNNNNS
101: GELSGSSENS PTARKPGHTR SDSGSAPVPL IYSGQTATSP VMNVLPTGNI CPSGKILKTG MTPNRSSRTS RSDVLGSGMG NYGHGSIMRG GGKAEPASTR
201: GSGGGNEMVK RGGHVQSVDP EELKRLGNEC YKRGNFVDAL SLYDRAIAMS PASAAYRSNR AAALTGLGRL GEAVRECEEA VRLDPNYGRA HQRLASLFLR
301: LGQVENARKH LCYPGMQPDP SDMQRLQVVE KHISKCGDVR RVGDWKSVLR EVDAAVAAGA DSSYQLFMCR AEAFLKLHQI DDAESILLHI PKSEPHTNSS
401: SQARFFGMLC EAYSYFVRAQ IEMALGRFEN AVTAAEKASQ NDSRNVEVAV LLNNVRMVAR ARVRGNDLFK SERYTEACLA YGEGLRLDPS NSVLYCNRAA
501: CWFKLGQWER SIEDSNQALH IQPNYTKALL RRAASNSKLE RWEEAVKDYE ILRKELPNDN EVAESLFHAQ VALKKSRGEE VTNLKFGGEV EEVSGLEQFR
601: AAISLPGVSV VHFEVASNSQ CKQISPFVNT LCGRYPSINF LKVDIQQSPT VATAENVRIV PTFKIYKNGC RLKEIVCPSH DMLEHSVRHY SF

Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)

001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG

Arabidopsis Description

TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.