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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0188400-01
Os01t0205600-01
Os01t0647100-01
Os01t0731000-01
Os01t0949300-01
Os02t0208100-01
Os02t0473200-01
Os02t0591700-01
Os02t0629000-01
Os02t0665000-01
Os03t0129300-01
Os03t0209500-01
Os03t0299600-01
Os03t0755700-00
Os04t0334700-01
Os04t0334951-01
Os04t0336600-00
Os04t0337000-01
Os04t0414300-00
Os04t0473400-01
Os04t0520700-01
Os04t0686700-01
Os05t0186300-01
Os05t0342000-00
Os05t0432200-00
Os05t0474900-01
Os05t0510300-01
Os05t0519300-01
Os05t0529200-01
Os05t0529400-01
Os06t0632200-02
Os07t0595900-01
Os07t0596000-01
Os07t0691300-01
Os08t0478200-01
Os08t0504700-01
Os09t0345000-02
Os09t0486500-02
Os10t0114400-01
Os10t0337500-01
Os10t0481000-00
Os10t0512800-01
Os11t0118300-01
Os11t0141400-01
Os11t0168600-01
Os11t0425800-01
Os11t0660500-01
Os12t0117400-01
Os12t0138050-00
Os12t0443700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G42580.1 Os07t0595900-01 AT1G26650.1 19000166
AT2G42580.1 Os03t0129300-01 AT1G42970.1 19000166
AT2G42580.1 Os01t0731000-01 AT1G53400.1 19000166
AT2G42580.1 Os05t0529400-01 AT1G53400.1 19000166
AT2G42580.1 Os09t0345000-02 AT1G53400.1 19000166
AT2G42580.1 Os03t0209500-01 AT1G69420.1 19000166
AT2G42580.1 Os07t0596000-01 AT1G69420.1 19000166
AT2G42580.1 Os10t0337500-01 AT1G69420.1 19000166
AT2G42580.1 Os02t0591700-01 AT1G74050.1 19000166
AT2G42580.1 Os04t0473400-01 AT1G74050.1 19000166
AT2G42580.1 Os05t0432200-00 AT1G75750.1 19000166
AT2G42580.1 Os04t0686700-01 AT1G76920.1 19000166
AT2G42580.1 Os01t0647100-01 AT1G80300.1 19000166
AT2G42580.1 Os02t0208100-01 AT1G80300.1 19000166
AT2G42580.1 Os10t0114400-01 AT2G01950.1 19000166
AT2G42580.1 Os05t0519300-01 AT2G20670.1 19000166
AT2G42580.1 Os04t0414300-00 AT2G27330.1 19000166
AT2G42580.1 Os11t0118300-01 AT2G30520.1 19000166
AT2G42580.1 Os12t0117400-01 AT2G30520.1 19000166
AT2G42580.1 Os01t0949300-01 AT2G41410.1 19000166
AT2G42580.1 Os11t0141400-01 AT2G41410.1 19000166
AT2G42580.1 Os12t0138050-00 AT2G41410.1 19000166
AT2G42580.1 Os02t0473200-01 AT3G02740.1 19000166
AT2G42580.1 Os04t0334700-01 AT3G02740.1 19000166
AT2G42580.1 Os04t0334951-01 AT3G02740.1 19000166
AT2G42580.1 Os04t0336600-00 AT3G02740.1 19000166
AT2G42580.1 Os04t0337000-01 AT3G02740.1 19000166
AT2G42580.1 Os05t0474900-01 AT3G10980.1 19000166
AT2G42580.1 Os03t0299600-01 AT3G10985.1 19000166
AT2G42580.1 Os05t0342000-00 AT3G10985.1 19000166
AT2G42580.1 Os07t0691300-01 AT3G10985.1 19000166
AT2G42580.1 Os08t0504700-01 AT3G12630.1 19000166
AT2G42580.1 Os09t0486500-02 AT3G12630.1 19000166
AT2G42580.1 Os05t0510300-01 AT3G14400.1 19000166
AT2G42580.1 Os11t0660500-01 AT3G16640.1 19000166
AT2G42580.1 Os03t0755700-00 AT3G24830.1 19000166
AT2G42580.1 Os11t0425800-01 AT3G24830.1 19000166
AT2G42580.1 Os08t0478200-01 AT3G52300.1 19000166
AT2G42580.1 Os12t0443700-01 AT3G62120.1 19000166
AT2G42580.1 Os01t0205600-01 AT4G14440.1 19000166
AT2G42580.1 Os05t0529200-01 AT4G14440.1 19000166
AT2G42580.1 Os10t0512800-01 AT4G39050.1 21798944
AT2G42580.1 Os02t0629000-01 AT5G03230.1 19000166
AT2G42580.1 Os04t0520700-01 AT5G03230.1 19000166
AT2G42580.1 Os10t0481000-00 AT5G03230.1 19000166
AT2G42580.1 Os01t0188400-01 AT5G11670.1 19000166
AT2G42580.1 Os02t0665000-01 AT5G11670.1 19000166
AT2G42580.1 Os05t0186300-01 AT5G11670.1 19000166
AT2G42580.1 Os06t0632200-02 AT5G38530.1 19000166
AT2G42580.1 Os11t0168600-01 AT5G42440.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400054803 Potato cytosol 36.16 49.32
Os01t0218200-00 Rice plastid 70.57 42.11
VIT_18s0001g09830.t01 Wine grape cytosol 26.93 40.91
PGSC0003DMT400054902 Potato cytosol 28.18 37.79
CDY34224 Canola cytosol 6.48 37.68
Os02t0753500-01 Rice cytosol 27.18 37.33
GSMUA_AchrUn_... Banana endoplasmic reticulum 46.38 36.98
GSMUA_Achr7P24480_001 Banana cytosol 56.86 35.13
Os01t0616333-01 Rice cytosol, plastid 10.22 33.88
GSMUA_Achr4P08560_001 Banana cytosol 57.86 33.87
Os05t0587300-01 Rice cytosol 45.89 33.15
Bra023795.1-P Field mustard cytosol 7.23 32.95
KRH26223 Soybean nucleus 53.62 31.8
KRH55099 Soybean nucleus 53.62 31.71
Solyc10g007430.1.1 Tomato cytosol, plastid 29.68 31.48
KRH22291 Soybean plastid 45.64 31.34
PGSC0003DMT400054909 Potato cytosol 31.92 31.07
VIT_19s0014g01470.t01 Wine grape cytosol 53.62 31.02
KRH21985 Soybean cytosol 53.37 30.92
KRH27330 Soybean cytosol 53.37 30.66
PGSC0003DMT400054911 Potato cytosol 39.65 30.52
GSMUA_Achr3P25160_001 Banana cytosol 53.87 30.34
Bra030946.1-P Field mustard cytosol, plastid 50.62 30.3
CDY02514 Canola cytosol, plastid 50.62 30.3
VIT_12s0028g02240.t01 Wine grape cytosol 53.62 30.28
CDY25722 Canola cytosol, plastid 50.12 30.13
CDY25865 Canola cytosol 49.38 30.09
Bra038116.1-P Field mustard cytosol 49.38 30.09
Solyc07g062580.2.1 Tomato cytosol 52.37 29.96
CDY34222 Canola cytosol 22.94 29.87
PGSC0003DMT400032362 Potato cytosol 52.12 29.86
CDY45930 Canola cytosol 48.88 29.74
CDY40820 Canola mitochondrion 20.7 29.54
Solyc10g007420.2.1 Tomato cytosol 30.67 28.94
PGSC0003DMT400054904 Potato cytosol 43.14 28.64
Solyc10g007220.1.1 Tomato cytosol 35.91 28.51
Solyc10g007250.1.1 Tomato cytosol 19.7 28.32
PGSC0003DMT400054796 Potato cytosol, plastid 43.39 28.29
Solyc10g007230.1.1 Tomato cytosol 41.9 28.19
AT1G53300.1 Thale cress cytosol 48.88 28.04
Solyc10g007240.1.1 Tomato cytosol 41.4 27.95
CDX71941 Canola cytosol 46.88 27.89
CDY51514 Canola cytosol 46.38 27.8
Bra007405.1-P Field mustard cytosol 46.63 27.79
CDY49237 Canola cytosol 46.13 27.74
CDY42827 Canola cytosol 46.38 27.72
CDY61202 Canola cytosol 46.38 27.72
AT3G58620.1 Thale cress cytosol 47.13 27.71
Bra000267.1-P Field mustard cytosol 46.38 27.68
AT2G42580.1 Thale cress cytosol 47.63 27.64
KRH27037 Soybean nucleus 45.89 27.26
CDY55390 Canola cytosol 45.14 27.06
Bra004709.1-P Field mustard cytosol 43.14 26.33
PGSC0003DMT400091014 Potato nucleus 39.15 25.86
AT3G14950.1 Thale cress cytosol 43.39 23.84
Bra023793.1-P Field mustard cytosol 24.44 23.79
CDX98517 Canola cytosol 41.9 23.2
CDY32327 Canola cytosol 42.14 23.18
CDY20095 Canola nucleus 41.9 23.08
CDX97619 Canola cytosol 41.65 23.03
Bra027292.1-P Field mustard cytosol 41.9 22.89
Bra021583.1-P Field mustard nucleus 42.14 22.35
CDY34223 Canola cytosol 17.96 22.09
Bra023794.1-P Field mustard cytosol, nucleus, plastid 17.71 21.78
Os10t0486900-01 Rice cytosol 11.22 19.07
GSMUA_AchrUn_... Banana cytosol 10.22 15.3
Os01t0616300-01 Rice cytosol 0.0 0.0
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1ProteinID:BAF16830.2ProteinID:BAS92795.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734EnsemblPlantsGene:Os05g0210600EnsemblPlants:Os05t0210600-01
PFAM:PF00515PFAM:PF13181PFscan:PS50005PFscan:PS50293PANTHER:PTHR22904PANTHER:PTHR22904:SF402
UniProt:Q0DJZ3SMART:SM00028SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_1
InterPro:TPR_repeatUniParc:UPI0001B66EBCSEG:seg:::
Description
Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os05t0210600-01)
Coordinates
chr5:+:6859187..6862484
Molecular Weight (calculated)
44288.9 Da
IEP (calculated)
7.318
GRAVY (calculated)
-0.215
Length
401 amino acids
Sequence
(BLAST)
001: LYDRALALCP DSAACRANRA AALIGLTRLG EAVEECEEAI RLDPSYGRAH QRLASLQIRL GRTADARKQI GMGGLQPDIV ELHKLEAVDK HLGRFADARK
101: IGNWKSALRE CNAAIAAGAD SCAMLFASRA EALLQINQLD EADLAISRAS KLDCSSSCSQ DMMFCGFQSN SYLYYVHAQV DIAFGRFDSA MSSMEKARKI
201: DSGNVEVMAM HKSVRTVAQA RTLGNELFHS GKFAEAFLAY GEGLKHHPAN SVLYCNRAAC MFKLGQWEKS IEDCNEALKI QPNYWKALLR RAASYGKIEQ
301: WADSVKDYEV LRRELPGDTE VAEGHFHALV ALRSSRGEDV SNMKFGGEVE ALVGAEQFQM ATTLPGTILL KIFPFHCFHV HHAAKPQSRP WTNEVIGQQV
401: C
Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.