Factsheet for Os02t0208100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plastid: 21433289
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80300.1	Os01t0218200-00	AT2G42580.1	19000166
AT1G80300.1	Os05t0210600-01	AT2G42580.1	19000166
AT1G80300.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G206800.1	Wheat	golgi	85.56	86.94
HORVU6Hr1G036830.1	Barley	plastid	85.4	86.77
TraesCS6A01G178000.1	Wheat	golgi	84.44	86.36
KXG29763	Sorghum	plastid	88.41	86.36
TraesCS6D01G166400.1	Wheat	mitochondrion, plastid	84.76	86.27
GSMUA_Achr7P08430_001	Banana	plastid	66.98	74.56
GSMUA_Achr10P...	Banana	mitochondrion	68.1	70.68
GSMUA_Achr2P16990_001	Banana	plastid	67.78	70.46
Os01t0647100-01	Rice	plastid	71.75	70.41
VIT_09s0002g05710.t01	Wine grape	plastid	68.57	69.57
KRH44405	Soybean	endoplasmic reticulum	68.41	69.07
KRH47502	Soybean	mitochondrion	67.78	68.54
PGSC0003DMT400014304	Potato	plastid	67.94	68.37
Bra003560.1-P	Field mustard	plastid	66.67	68.18
Solyc03g119970.2.1	Tomato	plastid	67.62	68.16
Bra035190.1-P	Field mustard	mitochondrion, plastid	66.35	68.08
CDX87299	Canola	mitochondrion, plastid	66.35	68.08
CDY57697	Canola	plastid	66.51	68.02
CDX79394	Canola	plastid	66.51	68.02
CDY39988	Canola	mitochondrion, plastid	66.35	67.97
Bra016656.1-P	Field mustard	plastid	65.56	67.7
CDX96838	Canola	plastid	65.71	67.65
CDY36568	Canola	mitochondrion	65.4	67.54
Bra026126.1-P	Field mustard	plastid	65.24	67.49
CDY39658	Canola	mitochondrion	65.71	67.43
PGSC0003DMT400073724	Potato	mitochondrion, plastid	67.46	67.35
CDX83974	Canola	plastid	65.08	67.32
KRH23529	Soybean	endoplasmic reticulum	65.56	67.15
AT1G15500.1	Thale cress	mitochondrion	65.87	67.15
KRH09791	Soybean	extracellular	65.71	67.1
AT1G80300.1	Thale cress	plastid	66.35	66.99
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	66.83	66.93
Zm00001d038035_P002	Maize	plastid	16.03	52.33
Solyc08g066920.1.1	Tomato	cytosol	12.54	40.1

Protein Annotations

MapMan:24.2.2.14	EntrezGene:4328685	InterPro:ADP_ATP_car	EMBL:AK243677	ProteinID:BAD24996.1	ProteinID:BAD25005.1
ProteinID:BAS77570.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006862	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0015866	GO:GO:0015867
GO:GO:0016020	GO:GO:0016021	GO:GO:0031969	InterPro:MFS_trans_sf	EnsemblPlantsGene:Os02g0208100	EnsemblPlants:Os02t0208100-01
PFAM:PF03219	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	UniProt:Q6H8E4	SUPFAM:SSF103473	TIGRFAMs:TIGR00769
TMHMM:TMhelix	UniParc:UPI00003B42FD	RefSeq:XP_015626642.1	SEG:seg	:	:

Description

PLASTIDIC NUCLEOTIDE TRANSPORT PROTEIN 2Similar to plastidic ATP/ADP-transporter. (Os02t0208100-01)

Coordinates

chr2:+:6057100..6060267

Molecular Weight (calculated)

68123.3 Da

IEP (calculated)

10.117

GRAVY (calculated)

0.397

Length

630 amino acids

Sequence
(BLAST)

001: MESGLVASHR LRVPFAAAHH RHHPAAPPHL LRQRRGSVAA TPLRLGLHLP TPTPLRLPAA LPLRPSLPPL RAAAASAAAP EPVGSASPKF LGVETKTLKK
101: IVPLGLMFFC ILFNYTILRD TKDVLVVTAK GSSAEIIPFL KTWVNLPMAI GFMLLYTKLA DVLSKEALFY TVIFPFIAFF GAFGYLLYPM RDAIHPTALA
201: DRLLAALGPS FLGPVAILRV WSFCLFYVMA ELWGSVVISV LFWGFANQIT TVEEAKEFYP LFGLGANVAL IFSGRTVKYF SNMRQNLGPG VDGWAISLRG
301: MMSIVVLLGL VIAGIYWGVN KFVIDKSAAP VVERKKKDKP KLSMGESLKV LVSSRYVRDL ATLVVAYGIS INLVEVTWKS KLKAQYPSPN EYSSFMGDFS
401: TATGIATFTM MLLGRVILRK FGWGVAATIT PAVLLLTGVG FFSLILFGEP LTPLMATLGM TPLLAAVYVG AMQNIFSKSA KYSLFDPCKE MAYIPLDEDM
501: KVKGKAAIDV VCNPLGKSGG ALIQQFMILS FGSLANSTPY LGGILLVIVL AWLGAVRSLD SQFSPLAKQE LEKEKMLKAK TVETTAQVVG SGNGSLQETL
601: ASENSANGSA IKVSQEPEST TSEKSGQQSQ

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.